Gene Pmen_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0216 
SymbolflgL 
ID5106183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp218341 
End bp219258 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID640501432 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_001185722 
Protein GI146305257 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA TCACCAATTC GCAGATCACC TCGATGATGC ACAACTCGAT GAACGCCAGT 
TCCGCCGAGT TGGGCAAGCT GATGCAGCAG ATGGCCAGCG GCAAGCGCAT CCTGCTGCCA
TCCGACGATC CCATCGCCAG CGTGCGGGTG CTGCGCGTGC AGCGCGAGGA GGCGAGCCTG
GAGCAGTTCC GCAAGAACAT CGCCAACGTC TCCGGCAGCC TGTCGACCCA GGAGGCCAAC
CTCAAGTCCA CCTCCGACTC CATGCTCAAC GTGCGCGATC TGCTGCTGTG GGCGGCCAAC
GGCTCCAACA CCAGCGAAGA CCTGGCGGCC ATGGCCGGCG AACTGTCGAT CATCGAGGAC
ACCATCTTCA GCTTCGCCAA CGTGCGCGAT GAGGAAGGCC GCTACCTGTT CTCCGGCACC
CTCAGCGACA CCCCGGCGCT GAGCTTCGAC GCCGCGACCC AGACCTACAG CCTGACCGGC
AACGACAAGC ACCGTCAGGC CGCCGTGGCC AACGGCGTGC TGGTGGACGA GAACGTCACC
GCGGCCAGCG TCTTCGGCGC GGGCGTGGAC ATGCTCAACC AGCTGCGCGG GCTGATCAAC
ACGCTGCGCG ACCCGGCGCT GGACGCCAGC GACCCGGCCG TACGCCAGCA GATCGTCGAC
ACCCTCGGGG CGCTGGATGA CACCCATGGC CGGGTGCTCG GCTCGATCAC CGAGCTGGGC
GGCCGGCAGA ATGCCCTGAG CCTGCTCAAG GACAGCAACG AGGACGTCTC GCTGGTCAAC
CAGAAGATCG AGGGCGAGCT GTCGCAGCTG GACTACGCCG GCGCCACCAT CGATCTGAAC
AACTATCAGC TGGCCCTCGG CGCGACGCAG AAGACCTACC TGAAAATCAA CGAGATGTCG
TTGTTCAGCC TGCTGTAA
 
Protein sequence
MMRITNSQIT SMMHNSMNAS SAELGKLMQQ MASGKRILLP SDDPIASVRV LRVQREEASL 
EQFRKNIANV SGSLSTQEAN LKSTSDSMLN VRDLLLWAAN GSNTSEDLAA MAGELSIIED
TIFSFANVRD EEGRYLFSGT LSDTPALSFD AATQTYSLTG NDKHRQAAVA NGVLVDENVT
AASVFGAGVD MLNQLRGLIN TLRDPALDAS DPAVRQQIVD TLGALDDTHG RVLGSITELG
GRQNALSLLK DSNEDVSLVN QKIEGELSQL DYAGATIDLN NYQLALGATQ KTYLKINEMS
LFSLL