Gene Pmen_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0211 
Symbol 
ID5106178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp213261 
End bp214046 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID640501427 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001185717 
Protein GI146305252 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.625971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG CCCTTTGGGT CAGCAAGACC GGCCTGGCCG CCCAGGACAA GGCCATGAGC 
GCCGTGGCCA ACAACCTGGC CAACGTCAAC ACCACCGGCT TCAAGAGCGA CCGCGTGGTG
TTCGAGGACC TGTTCTACGC CATCGAGCTG CAGCCCGGTG CCCAGGCCGA TCAGGTCAAC
ACCGTGCCGT CCGGCATTCA GCTGGGCAGT GGCGTGCGCG TCGCCGGCAC GCAGAAGGTG
TTCACCGAGG GCAGCATCCA GACCACCGGC CAGCCGATGG ACCTGGCCAT CATCGGCAAC
GGCTTCTTCC AGGTGGAGGC GCCCAACGGC GACATCTACT ACACCGAGAG CGGCCAGTTC
CAGCTCAATG CCGAGGGCGT GATCGTCAAC GCCCAGGGCC TGCCGCTGGT GCCGGGCATC
GAAGTGCCGG CCGGCAGCAG CCGCTTCACC GTGGGCAGCG ACGGCATCGT CACCGCGGTG
ATGGCCGGCG AGACCCTGCC GGTGGAGCTG GGCCAGATCA CCCTGGCCAA CTTCGCCAAC
CCGGGCGGCC TGGAAGCCCT CGGCGGCAAC CTCTACCGCG AGACCGTGGC CAGCGGCGAG
CCGGTGGAAG GCACGCCGGG CGAGGACGGC CTGGGCAACC TCAAGCAGGG TGTGCTGGAA
GGCTCCAACG TGCAGGTGGT CGAGGCCATG GTCAACATGA TCGCCATCCA GCGCGCCTAC
GAGGCCAACG CCAAGGTGCT GGACGCCGCG TCCGGCATGC AGCAGTTCCT CAACCAGACC
GTGTGA
 
Protein sequence
MSSALWVSKT GLAAQDKAMS AVANNLANVN TTGFKSDRVV FEDLFYAIEL QPGAQADQVN 
TVPSGIQLGS GVRVAGTQKV FTEGSIQTTG QPMDLAIIGN GFFQVEAPNG DIYYTESGQF
QLNAEGVIVN AQGLPLVPGI EVPAGSSRFT VGSDGIVTAV MAGETLPVEL GQITLANFAN
PGGLEALGGN LYRETVASGE PVEGTPGEDG LGNLKQGVLE GSNVQVVEAM VNMIAIQRAY
EANAKVLDAA SGMQQFLNQT V