Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0205 |
Symbol | |
ID | 5106172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 208742 |
End bp | 209587 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640501421 |
Product | SAF domain-containing protein |
Protein accession | YP_001185711 |
Protein GI | 146305246 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.620643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAACC TTCAAGAGAG CAGCAGGCCT TTGATTTATC AGGATTTTCT CGGAGCTCAC GGCGCTCTTC GCGTCGCCCT GCTTCCGCAT CGGCGCAGCC GGGAGCGGAA AAGCGGAAAG GTTTTTTCCG CCTGCGCGCT GGCGCTCTTC CTCTTCGCCC TGCTGCCATC GGCCGTCTTG CGTGCCGAGG TGGAGGCCGC CGGCCAGATC GACCAGGCGA TTGCCGCGCA CATGCAGCAG CAGCTCGCCG CCGAGGCCAA ACGTCAGGCC TGGCAGGGCA TGCGCCACAG CCTCGGCATC ACGCTGCTGA GCAGCGCCGA GCAGCTGCCG GCCTGCAGCC AGGCACTGGA GCTGACGGTC GCCAGCGACG ACCCGTCGCC CCTGGCGCGT CAGCGCCTGC AGCTGCGCTG CGCCGACGCG CCGGGCTGGA CCCGAGTGGC GCTGGTGCAG GCCAGCGTGT TCGTGGCCGC GGTGCATGCC GCACGGGTGA TCGAGCGCGG CCAGACCATC GCCGCCGAGC AGGTGCAGCT GCAGGAAGTG AATGTCGGCA GAAGCTCACG CGGCTTCTAC AGCAGCCTCG ACGAGGTGGT TGGCCAGGGC GCCAAGCGCC GCATCCGCGC CGGCGCGCTG ATCGCCCCGA GCCTGCTGAG CGCACCGCTG CTGGTGCGCC GCGGCCAGCA GGTGACCATC GTCGCCAACC AGGACGGCAT CTCCGCCTCG GCCACCGGCG AGGCGCTGGG CAACGGCCGC GAGGGTGAGG TGATCCGCGT GCGCAACCTC GGCAGCCAGA AGGTGATCGA GGCGCAGGTG GTGGAAGAAG GCGTGGTGAC CAGCACCTTC AGGTAG
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Protein sequence | MPNLQESSRP LIYQDFLGAH GALRVALLPH RRSRERKSGK VFSACALALF LFALLPSAVL RAEVEAAGQI DQAIAAHMQQ QLAAEAKRQA WQGMRHSLGI TLLSSAEQLP ACSQALELTV ASDDPSPLAR QRLQLRCADA PGWTRVALVQ ASVFVAAVHA ARVIERGQTI AAEQVQLQEV NVGRSSRGFY SSLDEVVGQG AKRRIRAGAL IAPSLLSAPL LVRRGQQVTI VANQDGISAS ATGEALGNGR EGEVIRVRNL GSQKVIEAQV VEEGVVTSTF R
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