| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0195 |
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| Symbol | |
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| ID | 5106875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 196525 |
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| End bp | 197358 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501411 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001185701 |
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| Protein GI | 146305236 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCA GCCCCGAAAC AACGGCCGCC GAGCCGGAAA GCAGCATCGC CTGCCTGATC
ATCAAGACCG GGCGCAACGA CTGCTACGCG CACTTCTATC CAGCGCTGTA CCAGTTGACC
CTGGTTCGCA GTGGCATCGA GGAGAAGATC GACCTCGGCT ACTCCGGCAG CCGTCTGCTC
GAGCGGCTGG TCCGGGAACC CGGCGAGGTG GTTGCGCGCG AGGAGCTGAT GAGCCATGCC
TGGGCCGACC GGGTGGTGGG CCAGGGCAGC CTCAACCAGC AGATCTACAC CCTGCGCCAG
ATACTGGGTG ACGAGAAGAG TCGCGAAATC ATCCAGACCC TGCCGCGCCG CGGCTACCTG
CTCAACCCCA GCTACCTGGT CTATCCGCCG AGCATCGACG ACATCGGCGC GGTTCAGGAG
GCCGACGCCC CCGGCACGCC GCCGAACTTC CTGCATCGGC ACAGCCGCCG TCGCACCTCC
TGGCTGGTGC TGCTGAGTGC GCTGGGCCTG ATGGCCGTGG GGCTGTTCGT CGCGCTCTAC
CAGTTCAGCC TGCCCGCCCG CCTGCACAGC AGCGAGCTGA ATCTGGGCCA GATCAGTCTG
CTCTACGTGG ATCAGGATGC GCAGCGTCTG CAGCAGCTGA TCCTGCAGAC CCACGGGCTG
GCCAGCCGCC TGTCCGAGCT GAGCGCGGCA CCGGCCGAGC TGATCATCGG CAACAGCGGC
GGCTTCTTCG AAGTGCTGTG CATGCAGCCG GGCGGCGGTG CCCGTTCGCT GATGTTCCAT
GAGAGCCAGC TGGCTCATCT CGCCGACGAT CAACTGAACC GGTGCCTGCC ATGA
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| Protein sequence | MNSSPETTAA EPESSIACLI IKTGRNDCYA HFYPALYQLT LVRSGIEEKI DLGYSGSRLL
ERLVREPGEV VAREELMSHA WADRVVGQGS LNQQIYTLRQ ILGDEKSREI IQTLPRRGYL
LNPSYLVYPP SIDDIGAVQE ADAPGTPPNF LHRHSRRRTS WLVLLSALGL MAVGLFVALY
QFSLPARLHS SELNLGQISL LYVDQDAQRL QQLILQTHGL ASRLSELSAA PAELIIGNSG
GFFEVLCMQP GGGARSLMFH ESQLAHLADD QLNRCLP
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