Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0186 |
Symbol | |
ID | 5106866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 189850 |
End bp | 191145 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640501402 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_001185692 |
Protein GI | 146305227 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.175373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCG ATTCAGATTA CGTACAAAGC ATGGCGACCC AACTGGCCAA ATACGAGATT CAGGGCCAGT TGGCCAAGGC CAACCGCAAC CAGGCGGCGT ACAAGGCGCA GCTCAGCGCG CTGACGACCC TGGATACTGC GCTGAAAACC TTCAAGAGCG CCGCCAGCGG CCTCAAGCTG GCCGGCAGCA GCATGCTGGT CAACAGCGCC AGCTTCAGCC AGGAGGGGTA CGCCAGCGCC ACGGTGGGCA GTAAGGCGGT GGCCGGCAGT TACGATTTCT TCGTCCAGCA GCTGGCCAGC AAGAGTCAGC TCGCCCTGCA GGGCCTGCAG GATGGCGACC TGGGCAGCGG TACCCTGACC ATCGGCCAGG GGGGCGATTC GTTCGAGATC GACCTGGGCG CAGTGAGCAC CCTCGACGAG CTGGCCGCGG CGATCAACGG CGCCGGCGAC AACACCGGCG TCAAGGCGAC CCTGGTGCGC AGCAATGGCC AGGTCAACCT GGTGCTGACC AGCGAGAAGA CCGGCGCCGA TCAGGCCATC AGCCTCAGCG CCGGCGGCAA CGCCGCCTTC CAGGGCGCGG TGGCCGGTCG CCAGGAGCTC TCCGTGGCCA GGGACGCCAT CGTGCGTCTG GGCGGCGAGA CCGGTATCGA GCTGAGCAGC ACCAGCAACA CCTTCGACAA CATCATCGAC GGCGTCAGCC TGACCTTCAG CAAGGCGCAC AAGGCCGGCG ATACGCCGCT GACCATCGAG ATCGGCCAGG ACCAGAAGGC CACCAAGGAG AAGGCGCAGA CCTTCGTCAG CGCCTTCAAC GCGCTGATGA CCAGCTTCGA CTCGCTCACC GCCAGCGGCG GCGAGAGCGG CGGTCGCGGG CCCCTGGCCG GCGATGCCAG CGTGCGCGCC ATCGAGACCA TGCTCAACCA GCTGGTGCGC ACCTCGTTCG GCGGCGCCAG CCTCACCGAG TTCGGCATCG TCGCCAACCG CAACGGCAAG CTGACCATCG ACAACGCGCG CTTCGAGAAG GCCGTGGCGG CCAACCCGGA GGGCTTCGAG AAGCTGTTCA CCGACAAGGG CAACCTGCTC GACACCCTGG ACAAGAACCT GGCGGTCTAC ACCAGCAGCG CCGGTGGCCT GCTGACCAAC CGCAAGGACA CCCTCAACAC CCAGCTGCGC CGCGTCGATC AGCAGTTCGA CAACATCCAG AAGCAGTACG ACTCCTACTA CAGCCGCTAT CTCCGCCAGT ACACCGGTCT CATGCAGACC ATGGCGGCGA TGGAGCAGAC CTACGGAATG TTCTGA
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Protein sequence | MAIDSDYVQS MATQLAKYEI QGQLAKANRN QAAYKAQLSA LTTLDTALKT FKSAASGLKL AGSSMLVNSA SFSQEGYASA TVGSKAVAGS YDFFVQQLAS KSQLALQGLQ DGDLGSGTLT IGQGGDSFEI DLGAVSTLDE LAAAINGAGD NTGVKATLVR SNGQVNLVLT SEKTGADQAI SLSAGGNAAF QGAVAGRQEL SVARDAIVRL GGETGIELSS TSNTFDNIID GVSLTFSKAH KAGDTPLTIE IGQDQKATKE KAQTFVSAFN ALMTSFDSLT ASGGESGGRG PLAGDASVRA IETMLNQLVR TSFGGASLTE FGIVANRNGK LTIDNARFEK AVAANPEGFE KLFTDKGNLL DTLDKNLAVY TSSAGGLLTN RKDTLNTQLR RVDQQFDNIQ KQYDSYYSRY LRQYTGLMQT MAAMEQTYGM F
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