| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0186 |
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| Symbol | |
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| ID | 5106866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 189850 |
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| End bp | 191145 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501402 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_001185692 |
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| Protein GI | 146305227 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.175373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG ATTCAGATTA CGTACAAAGC ATGGCGACCC AACTGGCCAA ATACGAGATT
CAGGGCCAGT TGGCCAAGGC CAACCGCAAC CAGGCGGCGT ACAAGGCGCA GCTCAGCGCG
CTGACGACCC TGGATACTGC GCTGAAAACC TTCAAGAGCG CCGCCAGCGG CCTCAAGCTG
GCCGGCAGCA GCATGCTGGT CAACAGCGCC AGCTTCAGCC AGGAGGGGTA CGCCAGCGCC
ACGGTGGGCA GTAAGGCGGT GGCCGGCAGT TACGATTTCT TCGTCCAGCA GCTGGCCAGC
AAGAGTCAGC TCGCCCTGCA GGGCCTGCAG GATGGCGACC TGGGCAGCGG TACCCTGACC
ATCGGCCAGG GGGGCGATTC GTTCGAGATC GACCTGGGCG CAGTGAGCAC CCTCGACGAG
CTGGCCGCGG CGATCAACGG CGCCGGCGAC AACACCGGCG TCAAGGCGAC CCTGGTGCGC
AGCAATGGCC AGGTCAACCT GGTGCTGACC AGCGAGAAGA CCGGCGCCGA TCAGGCCATC
AGCCTCAGCG CCGGCGGCAA CGCCGCCTTC CAGGGCGCGG TGGCCGGTCG CCAGGAGCTC
TCCGTGGCCA GGGACGCCAT CGTGCGTCTG GGCGGCGAGA CCGGTATCGA GCTGAGCAGC
ACCAGCAACA CCTTCGACAA CATCATCGAC GGCGTCAGCC TGACCTTCAG CAAGGCGCAC
AAGGCCGGCG ATACGCCGCT GACCATCGAG ATCGGCCAGG ACCAGAAGGC CACCAAGGAG
AAGGCGCAGA CCTTCGTCAG CGCCTTCAAC GCGCTGATGA CCAGCTTCGA CTCGCTCACC
GCCAGCGGCG GCGAGAGCGG CGGTCGCGGG CCCCTGGCCG GCGATGCCAG CGTGCGCGCC
ATCGAGACCA TGCTCAACCA GCTGGTGCGC ACCTCGTTCG GCGGCGCCAG CCTCACCGAG
TTCGGCATCG TCGCCAACCG CAACGGCAAG CTGACCATCG ACAACGCGCG CTTCGAGAAG
GCCGTGGCGG CCAACCCGGA GGGCTTCGAG AAGCTGTTCA CCGACAAGGG CAACCTGCTC
GACACCCTGG ACAAGAACCT GGCGGTCTAC ACCAGCAGCG CCGGTGGCCT GCTGACCAAC
CGCAAGGACA CCCTCAACAC CCAGCTGCGC CGCGTCGATC AGCAGTTCGA CAACATCCAG
AAGCAGTACG ACTCCTACTA CAGCCGCTAT CTCCGCCAGT ACACCGGTCT CATGCAGACC
ATGGCGGCGA TGGAGCAGAC CTACGGAATG TTCTGA
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| Protein sequence | MAIDSDYVQS MATQLAKYEI QGQLAKANRN QAAYKAQLSA LTTLDTALKT FKSAASGLKL
AGSSMLVNSA SFSQEGYASA TVGSKAVAGS YDFFVQQLAS KSQLALQGLQ DGDLGSGTLT
IGQGGDSFEI DLGAVSTLDE LAAAINGAGD NTGVKATLVR SNGQVNLVLT SEKTGADQAI
SLSAGGNAAF QGAVAGRQEL SVARDAIVRL GGETGIELSS TSNTFDNIID GVSLTFSKAH
KAGDTPLTIE IGQDQKATKE KAQTFVSAFN ALMTSFDSLT ASGGESGGRG PLAGDASVRA
IETMLNQLVR TSFGGASLTE FGIVANRNGK LTIDNARFEK AVAANPEGFE KLFTDKGNLL
DTLDKNLAVY TSSAGGLLTN RKDTLNTQLR RVDQQFDNIQ KQYDSYYSRY LRQYTGLMQT
MAAMEQTYGM F
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