| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0177 |
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| Symbol | |
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| ID | 5106857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 178271 |
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| End bp | 179101 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501393 |
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| Product | transport-associated |
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| Protein accession | YP_001185683 |
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| Protein GI | 146305218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTT TGAGAACCTT GTTGCTGGCC GGTGGCACTG CGCTGCTGCT GAGTCTGACG
CCCCTGGCCA GCCATGCTGC CACGGACGGG CTGACCGAGC AGATCGAGGC CGCACGCCAG
GAGGGTTCGA TCTGGACGGC CTTCGCCCTG AACCGTCACC TCAACCCCTT CAGGCTCGAC
GTGGCAGTCG AGAAGGGCCG CGCGACCCTC GATGGTCAGG TCGAAAGCGA GGTGCAGAAG
GAGCTGGCCG AGGAGGTGGC GCTGAGCGTG AAGGGGGTGG AGAGCGTGGA TAACCGCATC
GTGGTCGATG CCGCCACCGC CGAGAACGAG CCGCCGCGGC TGGTGCAGCG GCTGGAGGAC
GCCAGCCTGG CGGCGACGGT GAAATCCAAG CTGCTGTGGA ACAGCAACAC CCGTGGCCTG
GATATCCAGG TCAAGAGCCA GAACGGCGCC ATCACCCTCA GCGGCCACGC GCAGACCCCG
GCCGCCAAGG AGTTGGCCGG CCAGCTCGCC GCCAACACCG ATGGCGTGCG CGAAGTGTTC
AATCACCTGA GCATCAGCAC CGCCGACAGC AGCAGTAGCG AGGTGCAGAC GGCTGTCGAG
GAAGCGCGCG AAGACATCAG CGACAGCTGG ATCACCAGCA AGGTCAAGGC CAGCTTCCTG
TATAGCCGCA ACCTCGATGC GCTGAACATC TCGGTGGACA CCGAGGACGG CCTGGTCAGG
CTACGCGGTA GCGTGCTGAG CAGTGCCGAG AAACGTCTGG CGGTGGAGAT CGCCCGCAAT
ATCCGCGGTG TGCGCGGCGT CGATGCCGAC GCCCTGCGCA TCAGCAGCTG A
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| Protein sequence | MPFLRTLLLA GGTALLLSLT PLASHAATDG LTEQIEAARQ EGSIWTAFAL NRHLNPFRLD
VAVEKGRATL DGQVESEVQK ELAEEVALSV KGVESVDNRI VVDAATAENE PPRLVQRLED
ASLAATVKSK LLWNSNTRGL DIQVKSQNGA ITLSGHAQTP AAKELAGQLA ANTDGVREVF
NHLSISTADS SSSEVQTAVE EAREDISDSW ITSKVKASFL YSRNLDALNI SVDTEDGLVR
LRGSVLSSAE KRLAVEIARN IRGVRGVDAD ALRISS
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