| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0176 |
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| Symbol | |
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| ID | 5106856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 176708 |
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| End bp | 178060 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501392 |
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| Product | two-component response regulator AlgB |
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| Protein accession | YP_001185682 |
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| Protein GI | 146305217 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGT CAGAACAGAC CAGCGGGCGA ATTCTGCTGG TGGACGACGA GGCGGCAATC
CTGCGCACCT TCCGCTACTG CCTGGAAGAT GAGGGCTACG AGGTCGCCGG CGCCAGCAGC
GCGGCGCAGG CCGAAGCGCT GTTGCAGCGC CAGGTGTTCG ACCTGTGTTT CCTCGACCTG
CGTCTGGGCG AGGACAATGG CCTCGACCTG CTGGCGCAGA TGCGCATCCA GGCCCCCTGG
ATGCGCGTGG TGATCGTCAC CGCCCACTCG GCCGTGGACA CCGCGGTCGA CGCGATCCAG
GCCGGCGCTG CCGACTATCT GGTCAAGCCC TGCACGCCGG ACCAGCTGCG CCTCGCCGCC
ATCAAGCAGC TGGAGGTGCG CGCCCTGGCG GCGCGGCTGG AGGCGCTGGA AGGCGAAGTG
CGCAAGGCCA AGGACGGTCT CGACTCGCAC AGCCCGGCGA TGATGGCGAT CCTGGAAACC
GCGCGCCAGG TGGCGGCTAC CGATGCCAAC ATCCTCATCC TCGGCGAATC CGGCACCGGC
AAGGGCGAAC TGGCCCGCGC CATCCACGGC TGGAGCCGCC GCGCCAAGCG CACCTGCGTG
ACCATCAACT GCCCGTCGCT GACCGCCGAG CTGATGGAAA GCGAGCTGTT CGGCCATGCC
CGCGGCTCCT TCACCGGCGC CAGCGAGAGC ACCCAGGGCC GGGTCAGCCA GGCCGACGGC
GGCACCCTGT TCCTTGACGA GATCGGCGAC TTCCCGCTCG CCCTGCAACC CAAGCTGCTG
CGCTTCATCC AGGACAAGGA ATACGAACGC GTGGGCGATC CGGTCACCCG CCGCGCCGAT
GTGCGCATCG TCGCCGCCAC CAACCTGGAT CTGGACGAGA TGGTGCGCGA GGGGCGCTTT
CGCGAGGATC TGCTGTATCG CCTCAACGTC ATCACCCTCA AGCTGCCGCC GCTGCGCGAA
CGCCATGAAG ACGTGATGTC CCTGGCCGAG CGCTTTCTCG CCCACTTCGT CAGCGATTAC
GGCCGCCCGG CCTGCGGCTT CAGCCCCGAG GCGGTCGCCG CCCTGCATTC CTACCACTGG
CCGGGCAACA TCCGCGAACT GCGCAACGTC ATCGAGCGCG CCAGCATCAT CTGCCAGCAG
GAGGCCGTGG AGGTCGCCCA CCTCGGCCTC GGCGGCAGCA GCGATGCGCC CAACGGCGCC
ATCCGCGTGG GCGCGCCCAT GAGCCTCGAG GAGCTGGAAA AGGCCCATAT CGCTGCCGTT
CTGGCCAGCA GCAACACCCT GGACATGGCC GCCAGGACCC TGGGCATCGA TACTTCGACC
CTGTATCGCA AACGCAAGCA GTACAACCTC TGA
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| Protein sequence | MAASEQTSGR ILLVDDEAAI LRTFRYCLED EGYEVAGASS AAQAEALLQR QVFDLCFLDL
RLGEDNGLDL LAQMRIQAPW MRVVIVTAHS AVDTAVDAIQ AGAADYLVKP CTPDQLRLAA
IKQLEVRALA ARLEALEGEV RKAKDGLDSH SPAMMAILET ARQVAATDAN ILILGESGTG
KGELARAIHG WSRRAKRTCV TINCPSLTAE LMESELFGHA RGSFTGASES TQGRVSQADG
GTLFLDEIGD FPLALQPKLL RFIQDKEYER VGDPVTRRAD VRIVAATNLD LDEMVREGRF
REDLLYRLNV ITLKLPPLRE RHEDVMSLAE RFLAHFVSDY GRPACGFSPE AVAALHSYHW
PGNIRELRNV IERASIICQQ EAVEVAHLGL GGSSDAPNGA IRVGAPMSLE ELEKAHIAAV
LASSNTLDMA ARTLGIDTST LYRKRKQYNL
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