| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0175 |
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| Symbol | |
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| ID | 5106855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 174898 |
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| End bp | 176694 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501391 |
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| Product | alginate biosynthesis sensor protein KinB |
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| Protein accession | YP_001185681 |
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| Protein GI | 146305216 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT CGATGAAGCT TCGCACGCGT CTGTTCCTCA GCATTTCCGC GCTGATCACC
GTGGCGCTGC TGGGGCTGCT GCTCGGGCTG TTCAGCGTCA CGCAGATGTC CCGCAGCCAG
AGCGACCTGA TCCAGCGCGG CTTTACCGCC GTGCAGATCG GCCAGAAGCT GCGCCAGCAC
CTGGGCGACG AGCTGATCCT GCTGATCGGC CAGACACCGA ACCCGGAGGC CCTGGAAAAC
ATCCGTCAGG CCTTTCGCAG CACCCTGGCC GAAGGCTTCA GCGCCAAACT GGGCGCGGAC
TACGTGCAGG GCCTCGAGCA GGCCGCGATC CTGCATCGCC AGATGGAACA GGTGGCTGAA
AGTGCCACTC CTGCCGGCCA GTCGCCGCAC AACCTGGCTG GCAACATCCC CTTTACCGAA
GCCTTCCAGA AGCTGCGCAA CCACCTGCTG GATCAGCAGG ACCGGGTCGT CAGCTGGGTC
ATCGCCGCCG AGCACAAGGC CGGCGAGCGC TCCCGGCTGA TCGCCGGCCT GCTGGTGATG
ACGGGCCTGG CCGTGCTGGC GATCGGCGTC ATCACCGCCA ACGGCATCGC CCGCCGTTTC
GGCGCCCCCA TCGATCTGCT GGCGCGCGCC GCGGACCAGA TCGGCAAAGG CCAGTACGAC
GTGGTATTGC CGGTGTCACC GGTGGTGGAG CTGGCCGTGT TGAGCCGCCG CTTCGGCCTG
ATGACCGAGG CCTTGCGCCA GTACCATTCG AGCAATCTCA CGCAGCTGCT CAACAGCGAA
GGCCGTCTGA AGGCGGTGCT CGACAGCATC GACGACGGCC TGGTGATCCT CGATGCCCTG
GGCCGTGTCG AGCATGCCAA TCCCGTGGCC CTGAGCCAGC TGTCGTGGAA GCAGGACATA
CAGGATCAGC CCATCGGCCC GCTGCTGCCC GGCCATGCCG TGGACGAGGC ATTGCGCCAG
GTGCTGGCCG GCGAGCCGAT GCGCGAGCCA CCGGCAGACC TGCAGATCGA CCGCAACGGC
GAGGTTCGTC TGCTGGCTTG GGCCCTGACC CCGGTACAGG TTCGCGAAGG CGGCAGTGTC
GGCGCCGTGA TGGTGCTGCG CGACGTCACC GAGCAACGCG CCTTCGAGCG GGTACGCAGC
GAATTCATCC TGCGTGCCTC CCATGAGCTG CGTACACCGA TCACCGGCAT GCACATGGCC
TTCAGCCTGC TGCGCGAACG GCTGCAGGTG CCAGCGGGCG GACGCGAGCA GGACCTGATG
CGCACCGTCG ACGAGGAAAT GCGCCGCCTG GTGCAGCTGA TCGACGACCT GCTCAACTTT
TCGCGCTACC AGAACGGCCT GCAGACCCTG CAGCGGGTCC CGTGCGATCT CGCCGTCATG
CTCCAGCAGG CGCGCCAGCG CTTCACCGAC GAAGCAAGCG AGCGCGGCGT GACCATCACC
TGCGAGCTGC ACCAGCCGCT GCCGCGCCTG AGCCTCGATG AGGGCCAGCT GCACCGCCTG
CTCGACAGCC TGCTCAGCAA CGCGCTGCGC CACAGTGACT CGGGCGGCAC CGTGACCCTG
CAGGCGCACC GCCACGGCGA ACAGGTGATC GTCAGCGTGC AGGACCAGGG CGAGGGCATT
CCCTACGAAC AGCAGGCGCG CATCTTCGAG CCGTTCGTGC AGATCGGCCG GCGCAAGGGT
GGGGTCGGGC TGGGGCTGGC CCTGGCACGG GAGATCGTGC AGCTGTTTGG CGGGCAGATG
GGCGTACGCT CCCGCCCGCG CGAAGGCGCC AACTTCTACT TCAGCCTGCC GGTCTAG
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| Protein sequence | MKLSMKLRTR LFLSISALIT VALLGLLLGL FSVTQMSRSQ SDLIQRGFTA VQIGQKLRQH
LGDELILLIG QTPNPEALEN IRQAFRSTLA EGFSAKLGAD YVQGLEQAAI LHRQMEQVAE
SATPAGQSPH NLAGNIPFTE AFQKLRNHLL DQQDRVVSWV IAAEHKAGER SRLIAGLLVM
TGLAVLAIGV ITANGIARRF GAPIDLLARA ADQIGKGQYD VVLPVSPVVE LAVLSRRFGL
MTEALRQYHS SNLTQLLNSE GRLKAVLDSI DDGLVILDAL GRVEHANPVA LSQLSWKQDI
QDQPIGPLLP GHAVDEALRQ VLAGEPMREP PADLQIDRNG EVRLLAWALT PVQVREGGSV
GAVMVLRDVT EQRAFERVRS EFILRASHEL RTPITGMHMA FSLLRERLQV PAGGREQDLM
RTVDEEMRRL VQLIDDLLNF SRYQNGLQTL QRVPCDLAVM LQQARQRFTD EASERGVTIT
CELHQPLPRL SLDEGQLHRL LDSLLSNALR HSDSGGTVTL QAHRHGEQVI VSVQDQGEGI
PYEQQARIFE PFVQIGRRKG GVGLGLALAR EIVQLFGGQM GVRSRPREGA NFYFSLPV
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