Gene Pmen_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0164 
Symbol 
ID5106844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp164992 
End bp165582 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content64% 
IMG OID640501380 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001185670 
Protein GI146305205 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCT TCAGCATCGC CGTGCTGATC TTTTTGGTCA CCGACCCTTT CGGCAACATC 
GCCATCTATA TCGCCGCGCT GAAGAACGTC GCGCCGCGCC GACGCCTGTG GATCGCCGCG
CGCGAGCTGC TGTTCGCCCT CGGCCTGCTG CTGCTGTTCC TCACCTTTGG TGACAAATTC
CTCTCCAGCC TCGGGCTGTC GCGCGAGGCA ACCGCCATTG CCGGCGGTAT CATCCTGTTC
GTCATCGCCA TGCGCCTGAT CTTTCCCAGC CCGCAGGGCC TGCTCGGCGA CGTGCCGGAT
GGCGAGCCGA TGCTGGTGCC GCTGGCCACG CCGGCGGTGG CCGGGCCCTC GGCCCTGGCA
GTGCTGATGA CCCTGCGCAA CACCCACACC GGGCCGCTCT GGGAGCTTTA CCTGGCGGTC
ATCCTGGCGT GGGCGGCGAC GGCATTCATC CTGCTGCAGG CGTCGTTCCT GCAGCGTTTT
CTCGGTAATC GCGGGTTGAT GGCGGTGGAA CGACTGATGG GCATGCTGCT GATCATGCTC
AGCGTCGACA TGCTGCTGGA CAACCTGCAG AGCGTATTCG GTCACGCATG A
 
Protein sequence
MDIFSIAVLI FLVTDPFGNI AIYIAALKNV APRRRLWIAA RELLFALGLL LLFLTFGDKF 
LSSLGLSREA TAIAGGIILF VIAMRLIFPS PQGLLGDVPD GEPMLVPLAT PAVAGPSALA
VLMTLRNTHT GPLWELYLAV ILAWAATAFI LLQASFLQRF LGNRGLMAVE RLMGMLLIML
SVDMLLDNLQ SVFGHA