| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0163 |
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| Symbol | |
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| ID | 5106843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 163250 |
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| End bp | 164761 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501379 |
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| Product | uracil-xanthine permease |
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| Protein accession | YP_001185669 |
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| Protein GI | 146305204 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCA CCCCTCAGCG CCCCGAGGAC GAGAACCTCG GTATCGGCTC CAATCTTCTC
TACGGCCTAC AGCACGTACT GACCATGTAT GGCGGCATCG TCGCGGTGCC CTTGATCGTC
GGTCAGGCGG CCGGCCTGTC GCCTGCGGAC ATCGGCCTGC TGATCGCCGC CTCGCTTTTC
GTCGGCGGCG CGGCCACCCT GCTGCAGACC CTGGGTCTGC CCTTCTTCGG CTGCCAGTTG
CCGCTGGTGC AGGGCGTTTC CTTCGCCAGC GTCGCCACCA TAGTCGCGAT AGTCGGCGCC
AATGGTGGCG AAGGCGGCCT GCCGGTGGTG TTCGGCGCGG TGATAGGCGC GGCGCTGATC
GGTCTGCTGA TCACGCCGGT GTTCTCCAAG ATCACCAAGT TCTTCCCCCC GCTGGTGACC
GGCATCGTCA TCACCACCAT CGGCCTGACG CTGATGCCGG TGGCCGCGCG CTGGGCCATG
GGCGGCAACA GCGCAGCGGC TGACTTCGGC AGCATGGGCA ACATCGGCCT GGCGGCCTTC
ACCCTGGCCA CGGTGCTGCT GCTGAGCAAG GTCGGCAGCG CCACCATCTC GCGTCTGTCG
ATCCTGCTGG CGATGGTCAT CGGCACCCTG GTGGCGCTGG CCTTCGGCAT GGCCGACTTC
TCCCGGGTCG GCGAAGGCCC GGTGCTGGCC TTCCCGGCGC CGCTGCACTT CGGCATGCCG
GTATTCGAGG TGGCGGCGAT CGTCTCGATG CTGATCGTGG TGATGGTGAT CCTGGTGGAA
ACCTCGGCCG ACATCCTCGC GGTGGGCGAC ATCATCGATA CCAAGGTGGA CTCCAAACGC
CTCGGCAACG GCCTGCGCGC CGACATGATC GCCAGCATGG TGGCGCCGCT GTTCGGCTCC
TTCACCCAGA GCGCCTTCGC CCAGAACGTC GGCCTGGTGG CCGTGACCGG GGTGAAAAGC
CGCTACGTGG TGGCAACCGG CGGCCTGATT CTGGTCACCC TCGGCCTGCT GCCGATCATG
GGCCGGGTCA TCGCCGCGGT GCCGACCTCG GTGCTGGGCG GCGCGGGTAT CGTGCTGTTC
GGCACGGTCG CTGCCAGCGG TATCCGTACC CTGGCCAAGG TCGACTACCG CAACAACATG
AACCTGGTGA TAGTCGCCAC CTCGGTCGGT TTCGGCATGA TCCCCATCGC CATGCCGAGC
TTTTACCATC ACTTTCCGGA CTGGTTCGAG ACCATCTTCC ACTCCGGCAT CAGCTCGGCG
GCGATCATGG CGATCCTGCT CAACCTGCTG TTCAACCATT TCACCGCGGG CAATTCCGAC
CAGCAGTCGG TGTTCGTCGC CGGTACCGAG CGCAGCCTGC GCTATCGCGA CATCGCCGCC
CTGCATGAGG GCGACCATTT CATCGGCGGC AAGCTGTATG ACGCACAGGG CAACGAGGTG
CCGCTGCAGG ACGAGGAAGA GGCCCACGGC AAGACGCAGA CCAGACGGCA GGCAGCCTTG
GCCGACCACT GA
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| Protein sequence | MTSTPQRPED ENLGIGSNLL YGLQHVLTMY GGIVAVPLIV GQAAGLSPAD IGLLIAASLF
VGGAATLLQT LGLPFFGCQL PLVQGVSFAS VATIVAIVGA NGGEGGLPVV FGAVIGAALI
GLLITPVFSK ITKFFPPLVT GIVITTIGLT LMPVAARWAM GGNSAAADFG SMGNIGLAAF
TLATVLLLSK VGSATISRLS ILLAMVIGTL VALAFGMADF SRVGEGPVLA FPAPLHFGMP
VFEVAAIVSM LIVVMVILVE TSADILAVGD IIDTKVDSKR LGNGLRADMI ASMVAPLFGS
FTQSAFAQNV GLVAVTGVKS RYVVATGGLI LVTLGLLPIM GRVIAAVPTS VLGGAGIVLF
GTVAASGIRT LAKVDYRNNM NLVIVATSVG FGMIPIAMPS FYHHFPDWFE TIFHSGISSA
AIMAILLNLL FNHFTAGNSD QQSVFVAGTE RSLRYRDIAA LHEGDHFIGG KLYDAQGNEV
PLQDEEEAHG KTQTRRQAAL ADH
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