| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0150 |
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| Symbol | |
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| ID | 5106830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 149320 |
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| End bp | 150219 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501366 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001185656 |
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| Protein GI | 146305191 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAG TGCTACGAGC CCACTCCGAA CACGCCACCT GGCGCGACTA TCTGGAGTTG
ACCAAACCGC GGGTGGTGCT GCTGATGCTG ATCACCTCGC TGGTGGGCAT GTTCCTCGCC
ACCCGTGCCG GGGTGCCCTG GACCGTGCTG CTGTTCGGCA ACCTGGGGAT CGGTCTGTGC
GCTGGCGCGG CGGCGGCGGT CAACCACGTG GTGGACCGGC GCATCGACTC GATCATGGCG
CGCACGCACA AACGTCCGGT CACTGCCGGG CGGGTTTCGC CGGCGGCGGC GATAGCCTTC
GCGTTGCTGC TGGCCACTGC CGGCATGGGG CTGTTGCTGC TGTTCACCAA CCAGCTGGCG
GCCTGGCTCA CCCTCGCTTC GCTACTGGGC TATGCGGTGA TCTACACCGG CTTTCTCAAG
CGCGCCACGC CGCAGAACAT TGTCATCGGC GGTCTGGCCG GCGCTGCGCC GCCCTTGCTC
GGCTGGGTGG CGGTGACCGG GCACCTGAGC GCCGAGCCGC TGCTGCTGGT GCTGATCATC
TTCGCCTGGA CGCCGCCGCA CTTCTGGGCG CTGGCGATCC ATCGCAAGGC CGAATACGCC
AAGGCCGACA TCCCCATGCT GCCGGTCACC CATGGCGAGC ACTACACCAA GGTGCACATC
CTGCTCTACA CCCTGGTGAT GTTCGCCGTG ACCCTGCTGC CCTACGCCAT TCACATGAGC
GGGCCGCTCT ACCTGGTCTG CGCCCTGCTG CTGGGCGCGC GCTTCCTGCA CTGGGCCTGG
GTGCTGTACC GTGACAGCAA ACCGCACGCG GCGATCAACA CCTTCAAGTA CAGTATCTGG
TACCTGTTCC TGCTGTTCAT CGCTTTGCTG GCGGACCACT ACCTGCTGCT GAATATCTAG
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| Protein sequence | MATVLRAHSE HATWRDYLEL TKPRVVLLML ITSLVGMFLA TRAGVPWTVL LFGNLGIGLC
AGAAAAVNHV VDRRIDSIMA RTHKRPVTAG RVSPAAAIAF ALLLATAGMG LLLLFTNQLA
AWLTLASLLG YAVIYTGFLK RATPQNIVIG GLAGAAPPLL GWVAVTGHLS AEPLLLVLII
FAWTPPHFWA LAIHRKAEYA KADIPMLPVT HGEHYTKVHI LLYTLVMFAV TLLPYAIHMS
GPLYLVCALL LGARFLHWAW VLYRDSKPHA AINTFKYSIW YLFLLFIALL ADHYLLLNI
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