Gene Pmen_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0148 
Symbol 
ID5106828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp147646 
End bp148227 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID640501364 
Producthypothetical protein 
Protein accessionYP_001185654 
Protein GI146305189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAG CCATCGCCAT GCCTGAGGCA ACTCCGCGCA AGACGCGCGG CCGCCTGCAG 
TTGCTGCTCC TGCTGGCCGT CGCCATCGGC CCGATGCTGC TGGCCAGCGC CATGTACCAA
TGGCGTTTCT GGGTGCCGGA GGCGCGCAGC TACCACGGCG TGCTGATCGG CGACGGGCGA
ACCCTGAGCG ATCTCGGCGT GCAGGGCGAG GTGCAGCCGC TCTGGCAGAT TCTGGTCACG
GCGCCGGGTG CATGCGAGGC CGACTGCCGC GAGCTGGTCT ATCTGGCGCG GCAGATCCAG
ATCGGCCTCA ACCGCGAAAC GGCGCGGGCA AGCCATGGGC TGGCGCTGGC CGAGCCATTG
CCGGCCGAAT ACGACGCCAC CCTCAAGCGC GAATACCCGC GTCTGGGGCG TTACCAACTG
GACCCGCAGG CTTACGAGCG CGCCGTGGAG GCGCTCCCCG GCGCGCAGCT ATGGCTGATC
GACCCGCATG GCAACCTGGT GCTGCGTTAT CCCGCCGGCA GCAGGGGCAA GGCGATCCTC
GACGATCTGC GTTACCTGCT GAAGATTTCC AAGATCGGTT GA
 
Protein sequence
MNPAIAMPEA TPRKTRGRLQ LLLLLAVAIG PMLLASAMYQ WRFWVPEARS YHGVLIGDGR 
TLSDLGVQGE VQPLWQILVT APGACEADCR ELVYLARQIQ IGLNRETARA SHGLALAEPL
PAEYDATLKR EYPRLGRYQL DPQAYERAVE ALPGAQLWLI DPHGNLVLRY PAGSRGKAIL
DDLRYLLKIS KIG