Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0142 |
Symbol | |
ID | 5106822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 142477 |
End bp | 143601 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640501358 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_001185648 |
Protein GI | 146305183 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGAC ATCCACGAGT CTGGATGGGC CTCCTGCTGT GGCTGGCATT AGGCTCGGCG CATGCCCAGT GGACGGTGAA CATGGCACCC GGTGTTACCG AGGTCAGCCG CTCCGTCTTC GATCTGCACA TGACCATCTT CTGGATCTGC GTCGTGATCG GCGTGATCGT CTTCGGCGCC ATGTTCTGGT CGATGATCAT GCACCGCCGC TCCACCGGGC AGGAGCCCGC GCACTTCCAC GAAAGCACCA CGGTGGAAAT TCTCTGGACC GTCGTGCCAT TGGCCATTCT GGTGCTGATG GCGATACCGG CGACCAAGAC GCTGATCGAG ATCTACGACA CCTCCGAGTC CGAGTTGGAT ATCCAGGTCA CCGGCTACCA GTGGAAATGG CACTACAAGT ACCTGGGCCA GGACGTGGAG TTCTTCAGCA ACATGTCCAC GCCGCGTAGC CAGATCAACA ACCGCGAAGC CAAGGGCGAG CACTACCTGT TGGAGGTGGA CGAGCCGCTG GTGGTGCCGG TGGGCACCAA GGTGCGCTTT TTGATCACCG CCGCCGACGT GATCCACTCC TGGTGGGTGC CGGCGCTGGC AGTGAAGAAG GACGCCATCC CCGGCTTCAT CAACGAGTCC TGGACGCGCA TCGAGGAGCC CGGCATCTAC CGTGGCCAGT GCACCGAGCT GTGCGGCAAG GACCACGGCT TCATGCCGGT GGTGGTCGAA GCCAAGTCCA AGGAGGACTT TGCCGTCTGG CTGGCCGAAC GCAAGGAGGC CGCCGCCGCC GAGCGTGAGC TGACCAGCAA GGAATGGACC ATGGAAGAGC TGATGGCGCG TGGCGAGAAG GCCTACCTCA CCGCCTGCGC CGCCTGCCAC CAGCCCGGTG GCGAGGGGCT GCCGCCGATG TTCCCGGCAC TCAAGGGTTC GGCCATCGCC ATGGGCCCGG CCGAGGGCCA TATCGACATC GTCTACAACG GCAAGCCGGG CACCTCCATG GCCGCCTTCG GCAAGCAGCT GTCGCCGGTC GACCTGGCCG CCATCATCAC CTACGAGCGC AACGCCTGGG GCAACAAGGT CGGTGACATG GTCACGCCCA AGGACATTCT CGACTTCTCG AAGGCTCAGG AGTAA
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Protein sequence | MMRHPRVWMG LLLWLALGSA HAQWTVNMAP GVTEVSRSVF DLHMTIFWIC VVIGVIVFGA MFWSMIMHRR STGQEPAHFH ESTTVEILWT VVPLAILVLM AIPATKTLIE IYDTSESELD IQVTGYQWKW HYKYLGQDVE FFSNMSTPRS QINNREAKGE HYLLEVDEPL VVPVGTKVRF LITAADVIHS WWVPALAVKK DAIPGFINES WTRIEEPGIY RGQCTELCGK DHGFMPVVVE AKSKEDFAVW LAERKEAAAA ERELTSKEWT MEELMARGEK AYLTACAACH QPGGEGLPPM FPALKGSAIA MGPAEGHIDI VYNGKPGTSM AAFGKQLSPV DLAAIITYER NAWGNKVGDM VTPKDILDFS KAQE
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