| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0135 |
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| Symbol | |
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| ID | 5106815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 135917 |
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| End bp | 137359 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501351 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001185641 |
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| Protein GI | 146305176 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC TTCTCAATGA CCTCATCTGG AGCAAGCTGC TGATCGTGAT GCTGATCGGT
CTCGGTCTGT ACTTCAGCAT CGCCTCGCGC TTCGTGCAGT TCCGCTATTT CGGCAACATG
TTCCGCATCT TCCGCGAAGC CTTCCAGCGT CAGCCCGGTC AGCTCAGCTC GTTCCAGGCC
CTGATGCTGT CGGTGGCTGG CCGCGTCGGT GCCGGCAACA TCGCCGGTGT ATCGGTGGCC
ATCATGCTCG GTGGCCCGGG CGCGATCTTC TGGATGTGGG TGGTGGCGCT GGTCGGCATG
GCCACCAGCT ACTTCGAGTG CTCCCTGGCG CAGCTGTACA AGCGCCGCGA GGCCGACGGC
GGCTACCGCG GCGGCCCGGC GTTCTACATT CAGCACGGCC TCGGTCAGCG CTGGCTGGGC
ATCCTCGTGT CGATCCTGCT GCTGGTGACC TTCGGCTTCG GCTTCAACGC CGTGCAGTCC
TTCACCGTGG CCAGCTCGTT GCACGACACC TTCGGCATCC CGACCCTGGT CAGCGGCATC
GCTCTGACCG TGGTGATCGG CCTGATCATC TTCGGCGGCA TCAAGCGCAT CGCCCAGTTC
GCCGACGTGC TGGTACCGGT CATGGCCTTC TCCTACATCG GCATGGCCGT GCTGGTGATC
GGCATGAACA TCAGCGAAGT GCCGGCCACC TTCGCCCTGA TCGTCAAGAG CGCCTTCGGC
CTCGAGCCGG CCTTCGCCGG CGGCATCGGT GCGGCCATCA TCATGGGGGT CAAGCGCGGC
CTGTTCTCCA ACGAGGCCGG CCTGGGCAGC GCGCCCAACG TGGCCGCCGT CGCCGAGGTC
AAGCACCCGG TCGCGCAGGG CATCGTGCAG TCGCTCAGCG TATTCATCGA TACCCTCATC
CTATGCAGCT GCACCGCGCT GATCATCCTG CTGTCCGGCG TCTATCAGCC GGGCATGGAA
CAGGCCGGTG TGGTCCTGAC CCAGAGCGCC GTGGCCGCCG TGGTCGGTGA GTGGGGCCGG
GTGTTCATCA GCCTGGCGCT GCTGCTGTTC GTCTTCACCA CCCTGATCTA CAACTACTAC
CTCGGCGAGA ACGCCCTGGG CTTCTTCAGC CAGAAGCGCG GCCCGGTGAT GATCTACCGC
GTGCTGGTGG TCGGTCTGGT GCTGTGGGGT TCGGTGCAGG ATCTGGGCAC CGTGTTCGCC
TTCGCCGACG TGACCATGGG CCTGCTGGCC ATCGCCAACC TCATCGCCCT GGCGCTGCTG
TTCAAAGTGG GCCTGCGCCT GATGCGCGAC TACGATAGCC AGATCAAGGC CGGCGTGGAC
TCGCCGGTGT TCGACGCCAA GCAGTTCGCC GATCTGGACC TCGACCCCAG CGTCTGGGGC
GCCCAGGCGA GCAAGCCGGT GGCGGATCAG GCCGAGATCG GCGACCGCGT GCACCAGCGT
TGA
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| Protein sequence | MLDLLNDLIW SKLLIVMLIG LGLYFSIASR FVQFRYFGNM FRIFREAFQR QPGQLSSFQA
LMLSVAGRVG AGNIAGVSVA IMLGGPGAIF WMWVVALVGM ATSYFECSLA QLYKRREADG
GYRGGPAFYI QHGLGQRWLG ILVSILLLVT FGFGFNAVQS FTVASSLHDT FGIPTLVSGI
ALTVVIGLII FGGIKRIAQF ADVLVPVMAF SYIGMAVLVI GMNISEVPAT FALIVKSAFG
LEPAFAGGIG AAIIMGVKRG LFSNEAGLGS APNVAAVAEV KHPVAQGIVQ SLSVFIDTLI
LCSCTALIIL LSGVYQPGME QAGVVLTQSA VAAVVGEWGR VFISLALLLF VFTTLIYNYY
LGENALGFFS QKRGPVMIYR VLVVGLVLWG SVQDLGTVFA FADVTMGLLA IANLIALALL
FKVGLRLMRD YDSQIKAGVD SPVFDAKQFA DLDLDPSVWG AQASKPVADQ AEIGDRVHQR
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