Gene Pmen_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0133 
Symbol 
ID5106813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp134262 
End bp134933 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID640501349 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001185639 
Protein GI146305174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTG ATCTCGCTCA CTGGCAACCC CGTCCGACAC CGGACCAGCG CGTGCTGCAG 
GGCCGTTTCG TGCGTCTCGA AGCACTCGAT GTCACGCGGC ATGGTGAGGA TCTGTGGCGC
GCGCTGCAGG GGCCGGACCC GGCGCTTTGG GATTATCTGC CCTACGGCCC GTTCATCGAG
CGAGGCGTCT TCGATACCTG GCTGGCCGGC AATGCGCAGA GCCGTGACCC GCTGTTCTAT
GCGGTGGTCG ACCTGGCCAG CGGCCGCGCC CTGGGACTGT TCAGCTACCT GCGTATCACC
GCGCAGGACG GCAGCATCGA AATCGGCCAC GTCGCCTTCG GCGCGCCGAT GCAGCGCACC
CCGGGCGCGA CCGAGGCGGT CTATCTGCTG GCGCGCCATG CCTTCGACGA TCTCGGCTAT
CGCCGCCTGG AATGGAAGTG CGACGCGGCC AATGCCCGCT CGCTGCGCGC CGCCGAGCGC
TTCGGCTTCA TCCGGGAAGG GTTGTTCCGT CAGCACATGG TGCGCAAGGG CCGCAACCGT
GACACCGCCT GGTTCTCCAT CATCGACGGC GAATGGCCGG CATGCCGCGA GGCCTTCGCG
CGCTGGCTGG CGGCGGACAA CTTCGATGAG GCGGGGCGGC AGAAGCAGCG CCTGGAGGCG
TTGCGGGGGT AA
 
Protein sequence
MTRDLAHWQP RPTPDQRVLQ GRFVRLEALD VTRHGEDLWR ALQGPDPALW DYLPYGPFIE 
RGVFDTWLAG NAQSRDPLFY AVVDLASGRA LGLFSYLRIT AQDGSIEIGH VAFGAPMQRT
PGATEAVYLL ARHAFDDLGY RRLEWKCDAA NARSLRAAER FGFIREGLFR QHMVRKGRNR
DTAWFSIIDG EWPACREAFA RWLAADNFDE AGRQKQRLEA LRG