Gene Pmen_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0110 
Symbol 
ID5106295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp112621 
End bp113043 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content40% 
IMG OID640501326 
Producthypothetical protein 
Protein accessionYP_001185616 
Protein GI146305151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTA TATTTTTTGT CTTGGTCTTT TCTATATGCT TTCCGTTAGT GGTAAATGGC 
TCGGAAAGCC ATATGCCTAT TTTTATGTGC AAAACGAAAA ATAATAAGAA TATTGAGGTG
TATAGAGATG GAGATATGGT GACCTATTCG TTTGGTAGAA GCGATTACCC GCCAGAACTT
AAATTGACAC GGTCAATGGC AGATTTAGAG GTCGCAATAG GCAGTGTTTC TGGGAATGAA
ATTTCGAATT CTATAACTTT TTCAAATGGC GTGTATGCGT ACAGAGTGAT GACAACGATT
AATAAAGTGT CTGCGACGCA GGAGCCCAGG CATGGGGTCT TGGTCAAGAA AAAAACTAAG
TACTTAGCCT ATATAGACTG CGTTCCAGAA ACTGTGCAAG GAAGTTTGCT TGACTTGGAG
TGA
 
Protein sequence
MMRIFFVLVF SICFPLVVNG SESHMPIFMC KTKNNKNIEV YRDGDMVTYS FGRSDYPPEL 
KLTRSMADLE VAIGSVSGNE ISNSITFSNG VYAYRVMTTI NKVSATQEPR HGVLVKKKTK
YLAYIDCVPE TVQGSLLDLE