| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0106 |
|---|
| Symbol | |
|---|
| ID | 5106291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 105438 |
|---|
| End bp | 106409 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640501322 |
|---|
| Product | protein kinase |
|---|
| Protein accession | YP_001185612 |
|---|
| Protein GI | 146305147 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAG CCGCCGAAGC CAGCGACCTC ACCTACTTCG CCCTGGCCGC CACCGCCGCC
AGGGAACCCG TGCGCGAAAC GCCGCGCCAG GCTCCCGGCG AGCTGCCGGA AGTGCTCGGC
GGCCGCTACC GGATCGAGCG TCTGCTCGGC GTCGGCGGTA TGGGCGCGGT GTATCGCGCG
CGCGATCTGC TGCGCGAACA GTTCGGTGAC CCCGAGCCCT ATGTCGCGCT GAAGACCCTG
AGCGACGACT TCGCCGAATA CCCGGACGCC AACGCCCTGC TCTACAGCGA GTTCGCCCTT
ACCGCGCGGC TCAGCCACCC CAACGTGGTG CGTCTGTTCG GTTTCGAGGT GGACATTCCC
AGCCAGCGCG CCTTCATCAC CCTGGAACTG CTGCGCGGCC TGACCCTCGA TCAGCTGCTC
TGCGAACGCC CCGAGGGCCT GCCCTGGGAC GAGCTGCGTG GCATCGCCAT CCCGCTGCTC
GAAGCCCTGT GCTATTCGCA CCAGCTGGGC GTGCTGCATG GCGATCTCAA GCCCAGCAAT
GTGATGCTGG CCGAAGACGG CCTGCGCCTG TTCGACTATG GTCTCGGCCA GCCGGTGGAG
GGCCTGCTGC CCGGTCTGCC ACGCCTGTGC CGCAGCCGCA TCGCCGCCTG GACACCGCGC
TACGCCGCGC TGGAGTTGCT CGAAGGCGCG CCGCTGTCGG CGGCTGCTGA TGTCTATGCG
CTGGCCTGCG TGCTGGTCGA GCTGGCCAGC GGGCAACACC CGTTCCGCCG CCTCAGCGCC
AAGCAGGCCA AGAGCATGGA GCTGGACAGG CAGTTGCAAC GCCCGGCGCA GGTGCCGCTG
CACTGCTGGC AGGCCCTGCG CACCGCGCTG GCCTTCGACG AAAGCCAGCG GCAGATCGAC
TGCAGCGAGC TGCTCGACGC GTTTCGCCGG CCACCGGCCT CGCGTCTGCG CCGCTGGCTG
GGCAAGGCAT AA
|
|---|
| Protein sequence | MIEAAEASDL TYFALAATAA REPVRETPRQ APGELPEVLG GRYRIERLLG VGGMGAVYRA
RDLLREQFGD PEPYVALKTL SDDFAEYPDA NALLYSEFAL TARLSHPNVV RLFGFEVDIP
SQRAFITLEL LRGLTLDQLL CERPEGLPWD ELRGIAIPLL EALCYSHQLG VLHGDLKPSN
VMLAEDGLRL FDYGLGQPVE GLLPGLPRLC RSRIAAWTPR YAALELLEGA PLSAAADVYA
LACVLVELAS GQHPFRRLSA KQAKSMELDR QLQRPAQVPL HCWQALRTAL AFDESQRQID
CSELLDAFRR PPASRLRRWL GKA
|
|---|
| |