| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0103 |
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| Symbol | |
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| ID | 5106288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 100296 |
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| End bp | 101177 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501319 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185609 |
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| Protein GI | 146305144 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA AGGAAATGGA ATACGGCCAG GATGACAAGA CGGTCATCCT CAACCGCAAG
GGCGAAGCCC GCGCCGAAAG CCCGCTGACC GACTTCAGCG CGCCACCGAA ATTCGAGCAG
CTGGAAGAAC GCATGATCTT CGCCGCGCGC CTGCGCCCGG CGGAGAGCTT CAACATCAGC
CTCAACCCGC TGGTGGCGGC GGCCTCCGCG CTGCTCTCGG AAGTGGTGCG GCTCAAGCAC
AGCTTCGAAA GCGAGGACCT GGACGCCCTC AACCAGCGCC TGACCCGCGA GATCAAGCTG
TTCGAACACC GCGCCCTGCA CGACGGCGCG GAAAGCAGCC AGGTGATGGC CGCGCGCTAC
GTGCTGTGCA CCGTGGTCGA CGAAGCGGTG GTGACCACGC CCTGGGGCAA CGAGAGCCAG
TGGTCGCAGA TGAGCCTGCT GTCCTCCTTC CACAACGAGA CCTTCGGCGG CGAGAAGTTC
TTCCAGCTGC TCGAGCGCCT GTCGCGCAAC CCGGTCAAGC ACCTGCCGAT GCTGGAGCTG
ATGTACCTGT GCCTGTCGCT CGGCTTCGAG GGCAAGTACC GCGTGCTGCC GCGCGGCATG
CTCGAGCTGG AAGCGGTGCG CGACAGCCTC TACCGGCAGA TCCGTCAGCT GCGCGGCGAT
GTGCCGCGCG AAGTCTCGCC GCACTGGCAG GGCCTCAAGG ACACCCGCCG GCGCCTGGTG
CGCATCGTGC CGTGGTGGCT GGTGGCGCTG TTCACCCTGA TGTGCCTGGT GATGATGTAC
GCCGGCTTCG CCTGGGTGCT CGGCGAGCAG CGCGACACCG TCCTCAAGCC GTATCAGCAA
CTCGACCCGG CCTCGGGTGT CAGCATGGAT GACGTGAAAT GA
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| Protein sequence | MTIKEMEYGQ DDKTVILNRK GEARAESPLT DFSAPPKFEQ LEERMIFAAR LRPAESFNIS
LNPLVAAASA LLSEVVRLKH SFESEDLDAL NQRLTREIKL FEHRALHDGA ESSQVMAARY
VLCTVVDEAV VTTPWGNESQ WSQMSLLSSF HNETFGGEKF FQLLERLSRN PVKHLPMLEL
MYLCLSLGFE GKYRVLPRGM LELEAVRDSL YRQIRQLRGD VPREVSPHWQ GLKDTRRRLV
RIVPWWLVAL FTLMCLVMMY AGFAWVLGEQ RDTVLKPYQQ LDPASGVSMD DVK
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