| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0102 |
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| Symbol | |
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| ID | 5106287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 98962 |
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| End bp | 100293 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501318 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185608 |
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| Protein GI | 146305143 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC ATAAAGTCAT CTGGCAGGAA GGCATGCTGC TGCGCCCGCA GCACTTCCAG
CAGAACGATC GCTACTTCGA GCACCAGCTC AAGGTGCGCA CGCAGAAACT AGACAGCTAC
GCCTGGGGCT TCTTCGAACT GGAGATCGAC CGCCAGTTCC TCAACATGGG CAAGCTGGTG
GTGAGCAAGG CCAGCGGCGT GCTGCCCGAC GGCAGCCTCT TCGACCTCGG CGCCGAACGC
GAGCCGCTGG GCCTGGACGT GCCGCCGAAC ACCGGCAATA CCCCGGTGTA CCTGGCGCTG
CCGCTGGTCA CCGGCAACCA TATCGAGAGC CGCCGCCCGG AGCAGAAGGA TGTGCTGGCA
CGCTACGTCG CCTTCGACGA GGAAGTCGCC GACTGCAACG CCGGCGGCAG CAGCCACAGT
CAGGTCAGCA CCGGCCGCCC GGATTTCCGC CTGCTGCTCG GCGAGCAGCA GAGCGACCAG
GCCTATGTGA AGCTCAAGCT GTGCGAGGTG CTCGACACCA CGCCGGACGG GGTGATCAGC
CTCGACCCGG AATTCAGCCC GACCTACGTC AACTTCCAGG CTTCCGGCTA CCTGCTGAGC
TGCCTCAAGG AAGTGATCAG CATGCTCGCC CACCGCGGTG ACATCCTCGC CGAGCGCATC
CGCGCCACCG GCAAGGTGGG CGGTGCCGAG GTCGGCGACT TCATGATGCT GCAGCTGATC
AACCGCTACG AACCGATCCT GCGTCACCAC CTGGGCGTCG AGCAGGTGCA TCCGGAGCAG
ATCTACCGCG AGCTGGTCGG CCTGCTCGGC GAGCTGGCGA CCTTCTCCAG CGAGACCAAG
CGCCCACGCC TGGAAGGCCG CTACCTGCAC AGCGACCAGG GCATGAGCTT CCGCAAGCTG
ATGGACGCCA TTCGCCAAGT GCTGTCGATG GTGCTCGAAC AGCACGCCAT CGAGATGCTC
CTGCAGCAGC GCCAGTACGG CATTCAGGTG TCGCCGCTGC ACGACCACAA GCTGCTCGGC
ACCTCCAGCT TCGTGCTCGC CGCCAGCGCC CAGTGCGATT CCGAGGAGCT GCGCCAGCGT
CTGCCGGCAC ACCTCAAGGT CGGCCCGGTG GAGCGCATCC GCCAGCTGGT CAACCTGCAC
CTGCCGGGGA TCAAGGTCAA ACCGCTGCCG GTGGCACCGC GGCAGATCCC CTTCCATTCG
GGCAAGACCT ACTTCGCCTT GGAGCTCAGC TCCGAGGAAC TGGCGCAGCT GGAACGCTCC
GGCGGCTTCG CCTTCCACGT GTCCGGCGAG TTCTCCGGGC TTGAGCTGAA ATTCTGGGCG
ATCAGGAACT GA
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| Protein sequence | MSQHKVIWQE GMLLRPQHFQ QNDRYFEHQL KVRTQKLDSY AWGFFELEID RQFLNMGKLV
VSKASGVLPD GSLFDLGAER EPLGLDVPPN TGNTPVYLAL PLVTGNHIES RRPEQKDVLA
RYVAFDEEVA DCNAGGSSHS QVSTGRPDFR LLLGEQQSDQ AYVKLKLCEV LDTTPDGVIS
LDPEFSPTYV NFQASGYLLS CLKEVISMLA HRGDILAERI RATGKVGGAE VGDFMMLQLI
NRYEPILRHH LGVEQVHPEQ IYRELVGLLG ELATFSSETK RPRLEGRYLH SDQGMSFRKL
MDAIRQVLSM VLEQHAIEML LQQRQYGIQV SPLHDHKLLG TSSFVLAASA QCDSEELRQR
LPAHLKVGPV ERIRQLVNLH LPGIKVKPLP VAPRQIPFHS GKTYFALELS SEELAQLERS
GGFAFHVSGE FSGLELKFWA IRN
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