| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0098 |
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| Symbol | |
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| ID | 5106283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 95546 |
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| End bp | 97078 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501314 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001185604 |
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| Protein GI | 146305139 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCGC TTAACCCCTC GCTGATGTTC AGCCAGATCC CCCAGCCGCT GCGCTATGCC
GAGGCGCTGT TGCAGCGCTT CGCCCAACTG GCCCGCCATG CCAGCGCCGA CGCTCTGCTC
GGCGGGCTGG TGGAAGCCGC CGCGCAGCTG TCTGCCAGCG AGCTGAGCCA GCTGTACCTG
CTCGACGCCA CCCACACCCG CCTGACCCTC AGCGCCGAGT GGCAGGACGG CCAACTGCAA
CGCCGTGCCG AGGCCAGCCT GCCCAGCGAC TATGACGGCG AACAGTTGCT GCAGTACTGC
CTGTGCCAGA ACCAGCTGCT CAGCCTCACC GAGCTGGATA GCAGCCTGCA CAGCATCGGC
TTCCTCCCGG AAAGCGGCCA GCCCTGGCGC AGCCTGCTGT GCCAGCCGCT GTTGGACGAA
CACCGGCAGG TCAATGGCTT GCTCCTCATC GCCAGCCACA AGCCCCGCGA GCTGCAGGGC
TTCGCCGGAT CCCTGGGTCA GCTCGGCGGC TTCGCCATTG CCCAGTTGCA CCTGCTGCAG
CGCCTGCGAG CACCGCAGAG CGAGGCCGCA ACACAACCGA CTCCAAGCTG CGCCAGCGGC
TACGGTCTGA TCGGCGACAG CCCGGCGATG CGCAACGTGT ACCAGCTGAT CGGCAAGGTC
CTGCACAACT CGGTCAGCGT TTTGCTGACG GGCGAAACCG GTACCGGCAA GGAGCTGGTG
GCGCGTGCTA TCCATGACTG TGGCTCCCGT CGCAGCAAAG CCTTCGTGGT GCAGAACTGC
GCCTCGTTGC CGGAAAACCT GCTGGAAAGT GAGCTGTTCG GCTACCGCAA GGGCGCCTTC
AGCGGCGCCG ACCGCGACCA TCAGGGCCTG TTCGATGCGG CCAATGGCGG CACCCTGTTC
CTCGATGAAA TCGGCGATAT GCCGCTGAGC CTGCAAGCCA AGCTGCTGCG CGTGCTGCAG
GAGGGTGAAG TGCGCCCGCT CGGTTCGACC CGCACGCACA AGGTCGATGT GCGCATCGTC
TCGGCCACGC ACCACAATCT GCGCAGCCTG GTCGAGGAAG GCCGCTTTCG CGAAGACCTG
TTCTATCGCC TGTCGCACTT CCCCATCGAG CTGCCGCCAC TGCGCGCCCG CGGTGAGGAC
ATCCTGCGCC TGGCGCGGCA CTTCGCCGTC GAGGCCGCGT GCTTCCTGCA GCGCGATGCC
TATCGCTGGT CGGAAGCGGC GCTGGAGCAC CTGGCCGGTT ACGCCTTCCC CGGCAACGTG
CGCGAACTCA AGGGCCTGAT CGCGCGCGCC GTGCTGCTGT GCGAGGGCGG CGAGCTGCTG
CCCGAGCATT TCAGCCTGGA GCAGACGCCG AGCGAAGGCA GCGCACCGCT GAGCCTGCGC
GAGCGCATGG ACCGGGTCGA ACGCAATCTG CTGCTCGACT GCCTGCGCAA GAACCGCGGC
AACCAGACCA ATGCCGCCAA CGAGCTGGGC CTGCCCCGGC GCACCCTGCT GTACCGCATG
CAGCGGCTGA AGATCAGCCC GAGCGAGGTC TGA
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| Protein sequence | MSSLNPSLMF SQIPQPLRYA EALLQRFAQL ARHASADALL GGLVEAAAQL SASELSQLYL
LDATHTRLTL SAEWQDGQLQ RRAEASLPSD YDGEQLLQYC LCQNQLLSLT ELDSSLHSIG
FLPESGQPWR SLLCQPLLDE HRQVNGLLLI ASHKPRELQG FAGSLGQLGG FAIAQLHLLQ
RLRAPQSEAA TQPTPSCASG YGLIGDSPAM RNVYQLIGKV LHNSVSVLLT GETGTGKELV
ARAIHDCGSR RSKAFVVQNC ASLPENLLES ELFGYRKGAF SGADRDHQGL FDAANGGTLF
LDEIGDMPLS LQAKLLRVLQ EGEVRPLGST RTHKVDVRIV SATHHNLRSL VEEGRFREDL
FYRLSHFPIE LPPLRARGED ILRLARHFAV EAACFLQRDA YRWSEAALEH LAGYAFPGNV
RELKGLIARA VLLCEGGELL PEHFSLEQTP SEGSAPLSLR ERMDRVERNL LLDCLRKNRG
NQTNAANELG LPRRTLLYRM QRLKISPSEV
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