| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0095 |
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| Symbol | |
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| ID | 5106280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 90186 |
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| End bp | 91976 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501311 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185601 |
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| Protein GI | 146305136 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTA ACCACTACTA CCAAAGCGAA CTCACCGCCC TGCGCCAACT GGGCAAGCGC
TTTGCCGAGC GCAGCCCGGC GCTGGCGCCG TTTCTTGGCC AGGCCGGGCG TGATCCGGAT
GTCGAGCGCC TGCTCGAAGG CTTCGCCTTC CTTACCGGGC GTCTGCGGCA GAAGCTCGAC
GACGAGCTTC CGGAGCTGAC CCACTCGCTG ATGCACCTGC TGTGGCCGAA CTACATGCGT
CCGCTACCGG CCTTCAGCAT GCTCCAGTTC GACCCGCTGA CCCGTCCCGG TCCGGCGTTG
CCGGTCAAGC GCGGCACGCC GGTGGAGGCC AAGGCCATCG AGGGCGTCAC CTGCCGCTTT
CGCACCTGCT ACCCCACCGA GGTGCTGCCG CTGGCGCTGA ACGGCCTGGA CTACTCGGTG
AAGGGCGACG GCGCGCTGCT CAGCCTGCGT CTGGGCATGA GCGCCGACGG CCATCTCGGC
GAGATCGGCC TGAACAAGCT GCGTCTGCAC CTGGCCGGCG AGCGCTATAT CGGCCAGATG
CTCTACCTGG CGCTGCTGCG CAACCTCGGC GGCATCCAGC TGGTGCTGCT CGATGCCGCC
GGCAAGCCCA TGCAGGATGC CTTTGGCCAG ACTCTCGGCA CCTTGCAGCT CAAGCCCGAG
CAGGTGCAGC CGGTGGGCTT CGCCGAGGAC GAGGCGCTGA TCCCCTATCC GCTCAACACC
TTCCGCGGTT ATCGCTACCT GCAGGAATAC TTCGCCTTCC AGGACAAGTT CCTCTTCGTC
GACCTGCTCG GCCTGGATGC CATCCACGGC CTGCCCGAGG ATCTGCTCAA GCAGGCGCGC
GGCCTGGAGC TGCGCTTCGA TATCCACAAG GCCGGCGTGC AGCGCATCCG CCCGACCCTG
GAAAACGTGC GCCTGTACTG CACCCCGGTG GTCAACCTGT TCCAGCACGA CGCCATCCCG
ATCCGCCTCG ACGGCAAGCA GGACCAGTAC CTGCTGCTGC CGGCCGAATT CGACGCGCAG
CACTGCGGCG TGTTCTCGGT GGACCGCGTC ACCGGCTGGA AGCCGGGCGG CATGGGCTAC
GAGGAGTACG TGCCGTTCGA GTCGTTCGAG CACGACCCCA GCTTCGACGT GCCGGTGGCG
CGCCCGCACT ACAGCGTGCG TCAGCAGCCG TCGATGCTCG GCGACGGCCT GGAGACCTGG
CTCAGCTTCG GTCTGCGCAA CCTCGACCAG CACGAGACGC TGTCCATCGA GCTGACCTGC
ACCAACCAGA ATCTGCCGCG TCAGCTGAGC CTGGGCGATA TCTGCCTGCC CAGCGAGGAC
ACCCCGGATT TTCTCAGCTT CCGCAACATC AGCGCGGTCA CGCCTTGCTA TGCGCCGCCG
CTGCACCGCG ACTTCCTGTG GAAGCTGATT TCCAACATGT CGCTGAACTA CCTGTCGCTG
GCCAACGTCG AGGCGCTCAA GGTGATCCTC GAGACCTACG ACCTGCCGCG CTACTACGAC
CAGCACGCCG AGCGCGTCAG CAAGCGCCTG CTCGGTGGCC TCAAGAGCAT CGGCCACCGC
CATGTCGACC GCCTGCACCG CGGCCTGCCG GTACGCGGCG TGCGCACCGA ACTGACCATG
AACCCGGACG GCTACCTGGG CGAGGGCGAC CTGTTCCTCT TCGCCTCGGT ACTCAATGAA
TTTTTCGCCC TCTACGCCAG CCTCAACAGC TACCACGAGC TGCACGTACA GAGCACACAG
GGAGAGTTGT ACAAATGGAC GCCACGCATG GGGCAGCAGC CCCTGCTCTG A
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| Protein sequence | MSFNHYYQSE LTALRQLGKR FAERSPALAP FLGQAGRDPD VERLLEGFAF LTGRLRQKLD
DELPELTHSL MHLLWPNYMR PLPAFSMLQF DPLTRPGPAL PVKRGTPVEA KAIEGVTCRF
RTCYPTEVLP LALNGLDYSV KGDGALLSLR LGMSADGHLG EIGLNKLRLH LAGERYIGQM
LYLALLRNLG GIQLVLLDAA GKPMQDAFGQ TLGTLQLKPE QVQPVGFAED EALIPYPLNT
FRGYRYLQEY FAFQDKFLFV DLLGLDAIHG LPEDLLKQAR GLELRFDIHK AGVQRIRPTL
ENVRLYCTPV VNLFQHDAIP IRLDGKQDQY LLLPAEFDAQ HCGVFSVDRV TGWKPGGMGY
EEYVPFESFE HDPSFDVPVA RPHYSVRQQP SMLGDGLETW LSFGLRNLDQ HETLSIELTC
TNQNLPRQLS LGDICLPSED TPDFLSFRNI SAVTPCYAPP LHRDFLWKLI SNMSLNYLSL
ANVEALKVIL ETYDLPRYYD QHAERVSKRL LGGLKSIGHR HVDRLHRGLP VRGVRTELTM
NPDGYLGEGD LFLFASVLNE FFALYASLNS YHELHVQSTQ GELYKWTPRM GQQPLL
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