| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0091 |
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| Symbol | |
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| ID | 5106276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 86428 |
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| End bp | 87906 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501307 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185597 |
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| Protein GI | 146305132 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA CTAGCGCAGC CGTAGAAAGC AGCCACAGCG CCGCCGAACT CGGCATTCTC
GACCGCATCA TCGCCGAGAC CAAACTGACC CCCGATGACG AGGCCTACGA CATCGCCAAG
CGCGGCGTAT CGGCCTTCAT CGAAGAGCTG CTCAAGCCGC AGAACGAAAA CGAGCCGGTG
AAGAAGGCCA TGGTCGACCG CATGATCGCG GAGATCGACG CCAAGCTCAG CCGGCAGATG
GACGAGATCC TCCACCACCC GGACTTCCAG GCCCTGGAAT CCTCCTGGCG CGGTCTCAAG
CTGCTGGTGG ACCGCACCAA CTTCCGCGAG AACATCAAGC TGGAGATCCT CAACGCCTCC
AAGCAGGACC TGCTCGATGA CTTCGAAGAC AGCCCGGAAA TCGTTCAGTC CGGCCTGTAC
AAGCACATCT ACACCGCCGA GTACGGCCAG TTCGGTGGCC AGCCGGTCGG CGCCCTGATC
GCCAACTACT ACTTCGACCC GAGCGCTCCG GACGTCAAGA CCCTGCAGTA CGTCGCCTCG
GTGGCCTGCA TGTCCCACGC CCCGTTCATC GCCTCGGCCG GCCCGAAATT CTTCGGCCTG
GAAACCTTCA CCGGCCTGCC GGACCTGAAG GACCTCAAGG ACCACTTCGA AGGCCCGCAA
TTCACCAAGT GGCAGAGCTT CCGCGAGCAG GAAGACGCCC GCTACGTCGG CCTGACTGTA
CCGCGCTTCC TGCTGCGCAA CCCGTACGAT CCGGAAGACA ACCCGGTGAA GACCTTCGTC
TACAAGGAAA ACGTGGCCAA CAGCCACGAG CACTACCTGT GGGGCAACAC CGCCTACGCC
TTCGCCAGCC GTCTGACCGA CAGCTTCGCC AAGTTCCGCT GGTGCCCGAA TATCATCGGC
CCGCAGAGCG GTGGCGCGGT GGAAGACCTG CCGCTGCACC ACTTCGAGAG CATGGGCGAG
ATCGAGACCA AGATCCCCAC CGAGGTGCTG GTTTCCGACC GTCGCGAATA TGAACTTGCG
GAAGAGGGCT TTATCGCCCT GACCATGCGC AAGGGCAGCG ACAACGCCGC GTTCTTCTCC
GCCAACTCGG CGCAGAAGCC GAAGTTCTTC GGCATCAGCG AAGAAGGCAA GACCGCCGAG
CTGAACTACA AGCTGGGCAC CCAGCTGCCG TACATGTTCA TCGTCAACCG CCTGGCCCAC
TACCTGAAAG TGCTGCAGCG CGAGCAGATC GGCGCCTGGA AGGAGCGTAC CGACCTCGAG
CTGGAACTGA ACAAGTGGAT CCGCCAGTAC GTGGCCGACC AGGAGAACCC CAGCTCCGAA
GTGCGTAGCC GCCGTCCGCT GCGCGCCGCC CAGGTCATCG TCAGCGATGT CGAAGGCGAG
CCGGGCTGGT ACCGCGTCAG CCTGAACGTG CGCCCGCACT TCAAGTACAT GGGTGCCGAT
TTCACCCTGT CGCTGGTCGG CAAGCTGGAC AAGGAATAA
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| Protein sequence | MSTTSAAVES SHSAAELGIL DRIIAETKLT PDDEAYDIAK RGVSAFIEEL LKPQNENEPV
KKAMVDRMIA EIDAKLSRQM DEILHHPDFQ ALESSWRGLK LLVDRTNFRE NIKLEILNAS
KQDLLDDFED SPEIVQSGLY KHIYTAEYGQ FGGQPVGALI ANYYFDPSAP DVKTLQYVAS
VACMSHAPFI ASAGPKFFGL ETFTGLPDLK DLKDHFEGPQ FTKWQSFREQ EDARYVGLTV
PRFLLRNPYD PEDNPVKTFV YKENVANSHE HYLWGNTAYA FASRLTDSFA KFRWCPNIIG
PQSGGAVEDL PLHHFESMGE IETKIPTEVL VSDRREYELA EEGFIALTMR KGSDNAAFFS
ANSAQKPKFF GISEEGKTAE LNYKLGTQLP YMFIVNRLAH YLKVLQREQI GAWKERTDLE
LELNKWIRQY VADQENPSSE VRSRRPLRAA QVIVSDVEGE PGWYRVSLNV RPHFKYMGAD
FTLSLVGKLD KE
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