| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0086 |
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| Symbol | |
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| ID | 5106271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 80925 |
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| End bp | 81467 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501302 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001185592 |
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| Protein GI | 146305127 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATC CCCCCCCTTT ACTTGGGTTG GCACGCTTCA TCGATGCGTG CAACGCCCTA
TTCGGCAAGG CCTGCGCCTG GCTCACCCTG TTTCTGGTAA TCGGCACCGC CATCGTCGTG
GTACTGCGCT ACGGCTTCGG TATCGGCGCG ACGGCGCTGC AGGAGGCCGT GCTCTACGCC
CATGCGCTGG TATTCATGGG CGCTGCGGCC TGGGTGCTGC AGCGTAACGG CCATGTGCGC
GTGGACATCT TCTTCCAGAA ATTCAGCGGT CGCCGTCAGG CGTTGGTGGA AATTCTCGGC
ACCCTGCTGT TTCTGTTGCC GGTCGCGCTG TTCCTCGGCT GGGCCAGCTG GGACTACGTG
AGCAACTCCT GGGCGACCCG CGAGGCGTCG GGGGAGTCCG GCGGTCTGAA GTTCGTCTAC
CTGCAGAAGA GCATCATCCT GGTGCTGGTG GTCAGCCTGG CGCTGCAGGG CGTTTCCAAT
CTGATCAAGG CGCTCTACGT CATCAGCGGT CGCCTGCCGG CTCCGGAGGT GAAACATGGC
TGA
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| Protein sequence | MPNPPPLLGL ARFIDACNAL FGKACAWLTL FLVIGTAIVV VLRYGFGIGA TALQEAVLYA
HALVFMGAAA WVLQRNGHVR VDIFFQKFSG RRQALVEILG TLLFLLPVAL FLGWASWDYV
SNSWATREAS GESGGLKFVY LQKSIILVLV VSLALQGVSN LIKALYVISG RLPAPEVKHG
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