Gene Pmen_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0079 
Symbol 
ID5106264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp75366 
End bp75827 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID640501295 
Producthypothetical protein 
Protein accessionYP_001185585 
Protein GI146305120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGA TGCACGCCAT TGCCGCCGCC CTGTTGATGG GTGGCGCCCT GGCGGCCCAG 
GCCGCCGATC GAGATGCCGC CTTCCACCCG GGCGAGCTGC TGACCAGCAA CGCCGAATAC
CGCGAGGCCT GGCAGGATCT GGTCAAGAAC GAGGAACGCC TGCCGGACTG GCTGATCAAC
CTCAGCGGCC TGTCGACACC GATGCAGGCC GTGGAAGCCG ACAGTGACCG CTATCTGGTG
GGCCAGGTGT GCGAAGCGCA CAACTGCTTC AGCCAGCGCG CGTACATCGC CTTCGAATGG
GAGGACGACG ATGCCTATGC GCTCTACGTC CAGGTGCCCG AAGGCCTGCC GGAAGATCGC
GCCCCCAGCG AGCACGCCAG CCTGCGCTGG CTGGGCGAGC CCAGCGAGGA AATCCAGCAG
ATGCTGATGG AGCAGCTGCG CAACGACCCC AACTGGTATT GA
 
Protein sequence
MQLMHAIAAA LLMGGALAAQ AADRDAAFHP GELLTSNAEY REAWQDLVKN EERLPDWLIN 
LSGLSTPMQA VEADSDRYLV GQVCEAHNCF SQRAYIAFEW EDDDAYALYV QVPEGLPEDR
APSEHASLRW LGEPSEEIQQ MLMEQLRNDP NWY