Gene Pmen_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0077 
Symbol 
ID5106262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp73153 
End bp73734 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID640501293 
Producthypothetical protein 
Protein accessionYP_001185583 
Protein GI146305118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAT CAATGCTGAT GTTGCTGGCC GCGCTGGCGC TGGGTGGCTG CATCGAAAGC 
GAAACGCCGC TGGTCGAAGA GCGCCGCCTG CTGCTCAGCG GGGAGGATTT CTCCGCCTAC
GATGCGCCGG ATGGCGGTCG CTACGAGAAG CTGGTGACCT ATGCGGCGCG CAGCATCGAC
CTCAGCTTCG AGAGCGAAGG CAGCGACTGG TTCTACCTCT ACAGCGGCGT TTCGCTCTAT
CCGCGCGCCA GCGACGCGCT GATGACCAGC TACGCGGAAA CCTTCGGCGC CTCGTTCGGC
CTGCGCGGCA GCGGCCTGGT CGAGCAGGAG TTGCCGCTGC AAACCAAGCT GGCCGCACGC
GCCAGCCTCA AGCTGCTGAC CCAGGACGGC GAGCCGGTGG GCAACCTGTT CTATGCCACG
GTCGGCAACA AGTCGATGTT CACCATCTTC ACCGGCGTCT ACTTCGAGCG TGCCGAGGAT
TTCGAGGCCT TCGTCGCGCC CAAGCTGCTC GCCCTGCGTC AGTACAAGCA CGACGATCCG
CTGCTGACCT GGGCTGGCAG GACGCTCGGT TTCGACGAAT AG
 
Protein sequence
MFRSMLMLLA ALALGGCIES ETPLVEERRL LLSGEDFSAY DAPDGGRYEK LVTYAARSID 
LSFESEGSDW FYLYSGVSLY PRASDALMTS YAETFGASFG LRGSGLVEQE LPLQTKLAAR
ASLKLLTQDG EPVGNLFYAT VGNKSMFTIF TGVYFERAED FEAFVAPKLL ALRQYKHDDP
LLTWAGRTLG FDE