Gene Pmen_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0072 
Symbol 
ID5106257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp69732 
End bp70400 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID640501288 
Producthypothetical protein 
Protein accessionYP_001185578 
Protein GI146305113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATC GCTGGTTATG GACTTTTCCC GTGGTAGGCG CTTTTCTTGT TGCCATCGCA 
TTGGTACTAC AAATTCACAG ATGGAACGAA GAGGAGCGCA TGTTGCGAAC GACCGGCAGT
GTGGTGGCGG TGATGGGCAG GGGTTGTCCT CTCGTCGAGT TCTTCCCCCT TCCGGGGGAG
CGAGTCACCT TCACTGGCGA GGTCTGCAGC CGGCCTGGTT ATGCCAAAGG CGATATTGTC
GAGCTGTTCT ACGACCCCTT GGAGCCGCAG AACGCGCATA TCGATAGCTT TCTGCAGAAC
TGGTTCGTCA GCCTGATACT AGGTGGCATT GGTCTGTTCT TTACGTTAGT CGGTCTGGCT
CTGTTAATGC CCGAGGCGCT TGTCGACGGT CGGCGCAATC GACTCAAACG TAAAGGCCAG
GCCGTACAGG CACAGTTCGT GGAGGTCCGG CGCAACCCGC TTTCCACCCT CAACAACGTG
CCGGCCTGGC AACTGGTCTG CCAGTGGTAC AACCCGAGCA GCGGCGCGGT ACATCTGTTC
TACAGCGAAG ACCTGTGGTT CGACCCGCAG CCGTTTATCG AGAATGAATT TCTGCAGGTA
ATGGTCGATC CCGATGACCT TCGGCGTTAT AGCGTCGATA CCAGCTTCCT ACCGCGCCTG
GCAGATTGA
 
Protein sequence
MKDRWLWTFP VVGAFLVAIA LVLQIHRWNE EERMLRTTGS VVAVMGRGCP LVEFFPLPGE 
RVTFTGEVCS RPGYAKGDIV ELFYDPLEPQ NAHIDSFLQN WFVSLILGGI GLFFTLVGLA
LLMPEALVDG RRNRLKRKGQ AVQAQFVEVR RNPLSTLNNV PAWQLVCQWY NPSSGAVHLF
YSEDLWFDPQ PFIENEFLQV MVDPDDLRRY SVDTSFLPRL AD