| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0058 |
|---|
| Symbol | |
|---|
| ID | 5106243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 54504 |
|---|
| End bp | 55061 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640501274 |
|---|
| Product | SUA5/yciO/yrdC domain-containing protein |
|---|
| Protein accession | YP_001185564 |
|---|
| Protein GI | 146305099 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA ACTGGCAGGT ACAGCAAGCG GCGCGGGTGG TGTGTGAAGG CGGCGTGATC
GCCTACCCCA CCGAAGCGGT CTGGGGTCTG GGCTGCGACC CCTGGAACGA AGTCGCCGTG
GACCGCCTGC TGGCTCTCAA GGAGCGGCCC GTGCACAAGG GCCTGATTCT GGTGGCCGAC
GACATCGAGC AGTTCGACTT TCTCCTCGAT GATCTGCCGG CGATCTGGCA GGAGCGCCTG
GCCGCCAGTT GGCCGGGGCC GAACACCTGG CTGGTGCCGC ATCAGGACCG TCTGCCCGCA
TGGATCACCG GCGTGCACGA CAGTGTGGCC CTGCGCGTCA GTGATCATCC GCTGGTACGT
GCCCTCTGCC GGCTCACCGG ACCGCTGATT TCCACCTCGG CCAATCCGGC AGGCCGCCCC
GCGGCGCGCT CGCGGCTGCG CGTCGAGCAG TATTTCCCCC GGCAACTGGA CAAGGTGCTG
GGCGGCGCCC TGGGCGGGCG CAAGAACCCC AGCCTGATTC GCGACCTGCG CACGGGCGAT
GTGATTCGCT CGTCCTGA
|
|---|
| Protein sequence | MASNWQVQQA ARVVCEGGVI AYPTEAVWGL GCDPWNEVAV DRLLALKERP VHKGLILVAD
DIEQFDFLLD DLPAIWQERL AASWPGPNTW LVPHQDRLPA WITGVHDSVA LRVSDHPLVR
ALCRLTGPLI STSANPAGRP AARSRLRVEQ YFPRQLDKVL GGALGGRKNP SLIRDLRTGD
VIRSS
|
|---|
| |