| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0045 |
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| Symbol | |
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| ID | 5106719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 43376 |
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| End bp | 43777 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501261 |
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| Product | surface presentation of antigens (SPOA) protein |
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| Protein accession | YP_001185551 |
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| Protein GI | 146305086 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG AACATCTATC CCAGGAAAGC TTGCAGGAGA TGGCGGAAAT GGATGCTGAT
GCGCTGCCTG AGGGTTTCGA GGAACGACCT GGCGAAATGC ATCTGGAAGG TCAGGAGTTC
GCGCCGCAGG ACGAGCACGC GAGTGCCGTC GAGCCCCAGC AGATGGCGGC GCTTGGCAGC
ATCGCGCATT TGCCGCTGCA GCTTACCCTG CGCTGCGGCC AGTTGACCTT GAGCGTCGAT
CAACTGCGGC AGCTGGGCAG CGGCAGCGTT CTCGAGATCC ATGGGGTCGC CCCTGGCCAT
GCCACCCTTT GCCATGGTGA GCGTGTGGTG GGTGAGGGAG AGTTGGTGGA TGTCGATGGG
CGGCTGGGTC TGCAGATCAC CCGGATGGCG ACGCTGTCAT GA
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| Protein sequence | MSTEHLSQES LQEMAEMDAD ALPEGFEERP GEMHLEGQEF APQDEHASAV EPQQMAALGS
IAHLPLQLTL RCGQLTLSVD QLRQLGSGSV LEIHGVAPGH ATLCHGERVV GEGELVDVDG
RLGLQITRMA TLS
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