| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0029 |
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| Symbol | |
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| ID | 5106704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 28353 |
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| End bp | 28721 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640501246 |
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| Product | YscI/HrpB family type III secretion apparatus protein |
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| Protein accession | YP_001185536 |
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| Protein GI | 146305071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02497] type III secretion apparatus protein, YscI/HrpB, C-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTT CCAAGATAGA CGGACTGACG AGTCCCGACT TGAAGCTCGA CCAGGGACTG
GTCAGTGAGC CTTCTCAGGC AGATGTCGAT CTCTTTTCCA GCTTGATGCG AGACAACGGC
AACACGGCTG ACCAGCCCAG CCACCTGGCG GCCGTTATCG CCGAGACGGT GAATGCACGG
ATGACGTCTG TGGATGACCT CTCGCGGCAA GCCATGCGCC ACATGAAGGA GGCCGTGACC
GGCAACGATG TAAGCGCCAT CACGGATATG AGCCGTGCCC TCTCGCAGTA CTCGCTGCAA
ATGGCGGTAA CGACCAAGGT GGTCAGCAAG ACAGGGCAGG CACTCGAAAA ACTGACCAAC
ATGCAGTAG
|
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| Protein sequence | MSISKIDGLT SPDLKLDQGL VSEPSQADVD LFSSLMRDNG NTADQPSHLA AVIAETVNAR
MTSVDDLSRQ AMRHMKEAVT GNDVSAITDM SRALSQYSLQ MAVTTKVVSK TGQALEKLTN
MQ
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