Gene Pmen_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0019 
Symbol 
ID5106694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp20108 
End bp20545 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640501236 
ProductTIR chaperone family protein 
Protein accessionYP_001185526 
Protein GI146305061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGTG CTGCCTATTG CCGGTTGGTC GATGACCTTT GCCAGCTGGC TTTGTTGCCG 
AACCCGAAAG CGCTCTATGA ACGAACCGCC CTGACGGTGG GCAAGGTCAA CTTCAGCCTC
GTCGAGCGCT CAGGCGATCC GTACAGCGAG GTGTTGATCT ATACCGACCT GGGACCGTTG
CCCAGCCAGC GTCGAGATGC CGTGCTGCTG CGCTTGCTGG ATATCAACTT TCACCTGTTC
GTCGGTGCTG GCAGTCCCAG CTGTTCCTAC AACAGCGAGA CCCAGCGCCT GATGCTGGGT
GTCAGCCTCC TGCTGCAGGC TGCCACTGGC CAACGCTTGC TGGCACTGCT CGGGCAACTG
GCCGACATGG CTCATAACTG GCGTGACGAT CATTTCCTGG AGCGCCCGAG CCCACGTCAT
GCGCAGGTGA GGTTGTGA
 
Protein sequence
MPSAAYCRLV DDLCQLALLP NPKALYERTA LTVGKVNFSL VERSGDPYSE VLIYTDLGPL 
PSQRRDAVLL RLLDINFHLF VGAGSPSCSY NSETQRLMLG VSLLLQAATG QRLLALLGQL
ADMAHNWRDD HFLERPSPRH AQVRL