Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0016 |
Symbol | |
ID | 5106691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 17717 |
End bp | 18604 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501233 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | YP_001185523 |
Protein GI | 162286125 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGCAT TCAAAGGCCG GCTGGTGGTC GGCTTTCTCC GTCTGTTCGC CCTGCTGCCC TGGCGCGCCG TGCAAGCGGT GGGCAATGCC ATCGGCTGGC TGATGTGGAA ATTGCCCAAC GGCTCGCGCG ACGTGGTGCG CATCAACCTG AGCAAGTGCT TTCCCGAGCT GAACCAGGCC GAACTGGATC GTCTGGTCGG GCAGAGCCTC AAGGACATCG GCAAGACCCT GACCGAAAGC GCCTGCGCCT GGATCTGGCC GGCGCAGAAA TCGCTCAAGC TGATCCGCGA AGTGGAAGGC CTGGAGGTGC TGCAGCAGGC GCTGGCCTCG GGCAAGGGCG TGGTGGGCAT CACCAGCCAC CTGGGCAACT GGGAAGTGCT CAACCACTTC TACTGCAACC AGTGCAAACC GATCATTTTC TACCGCCCGC CCAAGCTCAA GGCCGTCGAC GAGCTGCTGC AGCAGCAGCG CGTGCAGATG GGCAACCGCG TGGCGCCCTC GACCAAGGAA GGCATCCTCA GCGTCATCAA GGAAGTGCGC AAGGGCGGCG CCGTGGGCAT TCCGGCCGAT CCGGAGCCGA GCCGTTCCGC CGGCGTTTTC GTGCCCTTTC TCGGCACCAC TGCGCTGACC AGCAAGTTCG TCCCGGGCAT GCTCACCGGC GGCAAGGCGG TGGGTGTATT CCTGCATGCG CTGCGTCTGC CCGATGGCAG CGGCTACAAG GTGATCCTCG AGGCGGCGCC CGAAGGCATG TACAGCGAGA ACGTGGAAGA AGGCGTGGCG GCGATGAGCG AAGTGGTGTC GCGCTACGTA CGCAACTACC CGAGCCAGTA CATGTGGAGC ATGAAGCGCT TCAAGAAGCG TCCGGACGGC GAGGCCAAGT GGTACTGA
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Protein sequence | MEAFKGRLVV GFLRLFALLP WRAVQAVGNA IGWLMWKLPN GSRDVVRINL SKCFPELNQA ELDRLVGQSL KDIGKTLTES ACAWIWPAQK SLKLIREVEG LEVLQQALAS GKGVVGITSH LGNWEVLNHF YCNQCKPIIF YRPPKLKAVD ELLQQQRVQM GNRVAPSTKE GILSVIKEVR KGGAVGIPAD PEPSRSAGVF VPFLGTTALT SKFVPGMLTG GKAVGVFLHA LRLPDGSGYK VILEAAPEGM YSENVEEGVA AMSEVVSRYV RNYPSQYMWS MKRFKKRPDG EAKWY
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