| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0009 |
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| Symbol | |
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| ID | 5106684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 9834 |
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| End bp | 11588 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501226 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001185516 |
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| Protein GI | 146305051 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCG TACAACTGCA TACCTTCACC ACCCATGACG GCGTCGAACT GAGCTATTGC
CACTGGCCGG CAACCGTGCC GGCGGACGGC TCACGTCAGG CCGTGGTGCT GTTTCATCGT
GGCCACGAGC ACGGCGGGCG CATGGCTCAC CTAGTGGACG AGCTGGAGCT GCCGCACTGC
GATTTCTTCG CCTGGGACGC CCGCGGCCAT GGCCTGTCGC CCGGTGCGCG CGGCGACAGC
CCGAGCTTCG CCACCAGCGT GCGCGACGTG CAGACCTTTA TCGAGCATAT CGGCAGCGCA
CACGGCATCG CCGAAGAGGA CCTGTCGGTG GTGGCGCAAA GCGTCGGCGC GGTGATCGTC
TCCACCTGGG CCCATGACTA CGCGCCGAAG GTGCGCTGCC TGGTGCTCGC CTCGCCGGCG
TTCAAGGTCA AACTCTACGT GCCCTTCGCC CGGCCCGGGC TGAAGCTGCT GCACGCCTGG
CGCGGCAACT TCTTCGTCAA CAGCTACGTG AAGGCGAGGT TCCTCAGCCA CGATCCCGAG
CGCATCGCCT CCTTCGAGAA CGACTCGCTG ATCGCCCGGC CGATCTCGGT GACCATGCTG
CTCGGCCTGT ACGAGGCCGC CGAGCGCGTC GTCGCCGACG CCCAGGCGAT CCAGGTGCCG
ACCCAGCTGC TGATCTCCGG CGCCGACTTC GTCGTCCACC GCAAACCGCA GGAGGACTTC
TTCGAGCGTC TCGGCAGCCT GCGCAAGGAA AAACACCTGC TGCCCGGCTT CTTCCACGAC
ACCCTTGGCG AGCGCGACCG CGCCCATGCC CTGAGCCGCG CGCGGCGCTT TATCCTGCGC
AACTTCGAGG AGCCGGTGAC GCGCCCCTCG CTGCTCGATG CCGATCGCCT GGGCGCCACC
TGCGCCGAAG CCGAAGCGCT GGCCGCGCCG CTGCCAAGGA ACTCGCTGCG CGACCTCTAC
TGGCGTGCCA CCCGTGCCGG CATGCGCCTG GGCAGTACGC TGTCGGCCGG AGTGAAGCTG
GGCTTCGACA CCGGCTTCGA TTCTGGCAGC ACCCTCGATT ACGTCTACCG CAACCAGCCC
ACCGGCAAGG GCGCGCTGGG CCGCCTGATC GATGCGAACT ACCTGGATTC CATCGGCTGG
CGCGGCATCC GCCAGCGCAA GCTGCACGCC GAGGAACTGC TGCGCCTGGC CATGACCAGG
CTGCGTGAGA CGGGCAGGGC GGTGCGCATC GTCGATATCG CCGCCGGCCA CGGCCGCTAC
ATCCTCGAAT CGCTGGAAGG CCAGCAGCAG CGCCCAGATT CGATCCTGCT GCGCGACTAC
AGCGACATCA ACGTGCGTGA CGGCAATGCC CTGATCGAGC AGAAGGGCCT GGCCGACATC
GCCCGCTTCG TCAAAGGCGA TGCCTTCGAC CGTGAGGATC TCGCTGCGCT GGAGCCGAAA
CCGACCCTGG CAGTGGTCTC CGGCCTGTAC GAGCTGTTCG GCAGCAACCA GATGGTCGGC
GACTCGCTGG CCGGGCTGGC GGCGGCGGTG GAGGAGGGTG GTTATCTGGT CTACACCGGC
CAGCCCTGGC ACCCGCAGCT GGAGCTGATC GCCCGCGCCC TGACCAGCCA CCGCGACGGC
CAGGCCTGGG TCATGCGCCG GCGCAGCCAG GCGGAGATGG ATCAGCTGGT GGAAGCGGCG
GGCTTTCGCA AGGTGGCGCA GCGCATCGAC CAGTGGGGCA TCTTCAGCGT ATCCCTGGCG
CAGCGGGTGA AGTGA
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| Protein sequence | MRPVQLHTFT THDGVELSYC HWPATVPADG SRQAVVLFHR GHEHGGRMAH LVDELELPHC
DFFAWDARGH GLSPGARGDS PSFATSVRDV QTFIEHIGSA HGIAEEDLSV VAQSVGAVIV
STWAHDYAPK VRCLVLASPA FKVKLYVPFA RPGLKLLHAW RGNFFVNSYV KARFLSHDPE
RIASFENDSL IARPISVTML LGLYEAAERV VADAQAIQVP TQLLISGADF VVHRKPQEDF
FERLGSLRKE KHLLPGFFHD TLGERDRAHA LSRARRFILR NFEEPVTRPS LLDADRLGAT
CAEAEALAAP LPRNSLRDLY WRATRAGMRL GSTLSAGVKL GFDTGFDSGS TLDYVYRNQP
TGKGALGRLI DANYLDSIGW RGIRQRKLHA EELLRLAMTR LRETGRAVRI VDIAAGHGRY
ILESLEGQQQ RPDSILLRDY SDINVRDGNA LIEQKGLADI ARFVKGDAFD REDLAALEPK
PTLAVVSGLY ELFGSNQMVG DSLAGLAAAV EEGGYLVYTG QPWHPQLELI ARALTSHRDG
QAWVMRRRSQ AEMDQLVEAA GFRKVAQRID QWGIFSVSLA QRVK
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