| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0002 |
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| Symbol | |
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| ID | 5106313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1601 |
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| End bp | 2704 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501219 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001185509 |
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| Protein GI | 146305044 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA CCATTCAACG CGAAGCCCTG TTGAAACCCC TGCAACTGGT CGCCGGTGTC
GTGGAACGAC GCCAGACGCT GCCGGTGTTG TCCAACGTCC TGCTGGTGGT CGAAGGCCAG
CAGCTCTCGC TTACCGGTAC CGACCTGGAG GTCGAACTGG TTGGCCGCGT CACCCTCGAA
GACGCTGCCG AGCCGGGCGA AATCACCGTA CCGGCGCGCA AGCTGATGGA TATCTGCAAG
AGCCTGCCGA GCGATGCGCT GATCGATATC CGCGTCGATG ACCAGAAGCT GCTGGTCAAG
GCCGGGCGCA GTCGTTTCAC CCTGTCGACG CTGCCGGCCA ATGACTTCCC CACCGTCGAG
GAAGGTCCGG GTTCGCTGAC CTTCAACCTG CCGCAGGCCA AGCTGCGTCG CCTGATCGAA
CGCACCAGCT TCGCCATGGC CCAGCAGGAC GTGCGCTACT ACCTCAACGG CATGCTGCTG
GAGGTGCAAA GCGGCATGCT GCGCGCCGTC GCTACCGACG GTCACCGTCT GGCGATGTGC
TCCATGGAGG CGGCCATCCA GCAGGACGGC AAGCATCAGG TGATCGTGCC GCGCAAAGGT
ATTCTCGAGC TGGCCCGTCT GCTCACCGAG CAGGATGCCG AAGTCGCCAT CGTGCTGGGG
CAGCACCACA TTCGCGCCAA CACCGGCGAA TTCACCTTCA CCTCGAAACT GGTGGACGGC
AAGTTCCCGG ATTACGAGCG CGTGCTGCCG CGTGGCGGTG ACAAGCTGGT GCTGGCCGAC
CGTCAGGGCC TGCGTGAGGC CTTCAGCCGT ACCGCGATCC TGTCCAACGA GAAGTACCGT
GGCATTCGTC TGACCCTGGC TGCCGGTCTG CTGAAGATCC AGGCCAACAA CCCGGAGCAG
GAAGAGGCCG AGGAAGAGAT CGTCGTCGAC TACGCTGGCG GCGGTCTGGA AATCGGTTTC
AACGTCAGCT ACCTGCTGGA CGTACTGGGC GTGATGGGCA CCGAGCAGGT ACGCCTGATC
CTGTCCGATT CCAACAGCAG TGCCCTGCTG CAGGAAGCCG ACAACGATGA TTCGGCCTAT
GTCGTCATGC CGATGAGGCT CTAA
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| Protein sequence | MHFTIQREAL LKPLQLVAGV VERRQTLPVL SNVLLVVEGQ QLSLTGTDLE VELVGRVTLE
DAAEPGEITV PARKLMDICK SLPSDALIDI RVDDQKLLVK AGRSRFTLST LPANDFPTVE
EGPGSLTFNL PQAKLRRLIE RTSFAMAQQD VRYYLNGMLL EVQSGMLRAV ATDGHRLAMC
SMEAAIQQDG KHQVIVPRKG ILELARLLTE QDAEVAIVLG QHHIRANTGE FTFTSKLVDG
KFPDYERVLP RGGDKLVLAD RQGLREAFSR TAILSNEKYR GIRLTLAAGL LKIQANNPEQ
EEAEEEIVVD YAGGGLEIGF NVSYLLDVLG VMGTEQVRLI LSDSNSSALL QEADNDDSAY
VVMPMRL
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