| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0001 |
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| Symbol | dnaA |
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| ID | 5105694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 82 |
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| End bp | 1566 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501218 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_001185508 |
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| Protein GI | 146305043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACTAT GGCAGCAGTG CGTCGAGCTT CTGCGCGACG AATTGCCGGC TCAGCAATTC
AACACCTGGA TCCGTCCTCT GCAGGTCGAA GCCGAAGGCG ACGAGCTGCG CGTCTACGCG
CCCAATCGTT TTGTGCTCGA CTGGGTCAAC GAAAAGTACC TGAGCCGCCT GCTCGAGTTG
CTGGGTGAGC GCGCCGGGGG CCTGGTGCCG GCGCTTTCCT TATTGATAGG CAGCAAGCGA
GCGGCTACCG CTCGGGTCGC ACCTACCGCG CCCTTGCCTG CCGCAGCGCG TGCGGCGCAG
GTTCAGGCAG CCGCCACGGC GAGCAAGCCG GTACCACCGC CCGCCCAGGA AGAACCCTCG
CGCGCCAGCT TCGACTCCAT GGCCGGCGCC GCGCCGCAGC CACCAACCCC AGCCGTCGCA
CCGCGTGCCG AGCGCACCGT GCAGGTCGAG GGCGGGCTCA AGCACACCAG TTACCTCAAC
CGCACCTTCA CCTTCGACAA TTTCGTCGAG GGCAAGTCCA ACCAGTTGGC GCGCGCCGCT
GCCTGGCAGG TTGCGGACAA TCCCAAGCAC GGTTACAACC CGCTGTTCCT TTATGGCGGC
GTGGGCCTGG GCAAGACGCA CCTGATGCAC GCCGTGGGTA ACCACCTGCT GGCGAAGAAC
CCCAACGCCA AGGTGGTGTA CCTGCATTCC GAGCGCTTCG TCGCCGACAT GGTCAAGGCG
CTGCAGCTCA ACGCCATCAA CGAATTCAAA CGCTTCTACC GTTCGGTGGA CGCGCTGCTG
ATCGACGATA TCCAGTTCTT CGCCAAGAAA GAGCGTTCCC AGGAAGAGTT CTTCCACACC
TTCAACGCCC TGCTCGAAGG CGGCCAACAG GTGATCCTCA CCAGCGACCG CTACCCGAAG
GAGATCGAAG GCCTGGAAGA GCGCTTGAAG TCTCGTTTCG GCTGGGGCCT GACCGTGGCC
GTCGAGCCGC CGGAGCTGGA AACCCGCGTG GCGATCCTGA TGAAGAAGGC CGACCAGGCC
AAGGTCGAGC TGCCGCACGA TGCCGCATTC TTCATTGCCC AGCGCATTCG CTCCAACGTG
CGTGAGCTGG AAGGTGCGCT GAAACGGGTG ATCGCCCACT CGCACTTCAT GGGCCGCGAT
ATCACCATCG AGCTGATCCG CGAATCCCTC AAGGATCTGC TGGCCCTGCA GGACAAGCTG
GTCAGCATCG ACAATATCCA GCGCACCACG GCCGAGTACT ACAAGATCAA GATTTCCGAT
CTGCTGTCCA AGCGTCGCTC ACGCTCCATC GCCCGGCCAC GCCAGGTGGC CATGGCATTG
TCGAAGGAGC TGACCAACCA CAGCCTGCCG GAAATCGGTG TGGCCTTCGG CGGTCGCGAT
CACACCACGG TATTGCACGC ATGCCGTAAG ATTGCTGAAC TTAGGGAATC CGACGCGGAC
ATCCGCGAGG ACTACAAGAA CCTGCTGCGC ACCCTCACTA CCTGA
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| Protein sequence | MELWQQCVEL LRDELPAQQF NTWIRPLQVE AEGDELRVYA PNRFVLDWVN EKYLSRLLEL
LGERAGGLVP ALSLLIGSKR AATARVAPTA PLPAAARAAQ VQAAATASKP VPPPAQEEPS
RASFDSMAGA APQPPTPAVA PRAERTVQVE GGLKHTSYLN RTFTFDNFVE GKSNQLARAA
AWQVADNPKH GYNPLFLYGG VGLGKTHLMH AVGNHLLAKN PNAKVVYLHS ERFVADMVKA
LQLNAINEFK RFYRSVDALL IDDIQFFAKK ERSQEEFFHT FNALLEGGQQ VILTSDRYPK
EIEGLEERLK SRFGWGLTVA VEPPELETRV AILMKKADQA KVELPHDAAF FIAQRIRSNV
RELEGALKRV IAHSHFMGRD ITIELIRESL KDLLALQDKL VSIDNIQRTT AEYYKIKISD
LLSKRRSRSI ARPRQVAMAL SKELTNHSLP EIGVAFGGRD HTTVLHACRK IAELRESDAD
IREDYKNLLR TLTT
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