Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_R0012 |
Symbol | |
ID | 5078440 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 539233 |
End bp | 542125 |
Gene Length | 2893 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640497619 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0815988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGTTAAGCGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT GGGGGAACCC GGCCGCATAA GCGGTCATCA TGTAGTGAAT ACATAGCTAC ATGAGGCGAA CGAGGGGAAC TGAAACATCT AAGTACCCTT AGGAAAAGAA ATCAACCGAG ATTCCCCTAG TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCTATGGG GTGTTAGTGG AATGGTCTGG AAAGTCCAGC GGCACAGGGT GATAGCCCCG TACACGAAAA CTAACCGTAG ATGAAAACGA GTAAGGCGGG ACACGTGACA TCCTGTTTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTACTTGAGA CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CATTTTGTAG CGAGGTTAAG CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGTGTAGA CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GAGCGAATAC CATTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA ACTCCGAATA CCAATGAGTA CTACTCGGGA GACAGACGGC GGGTGCTAAC GTCCGTCGTC AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TGTATGTTAA GTGGGAAACG ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAACATACCA CCGAAGCTAC GGGTGCAGCC CATTAGGGTT GCGCGGTAGA GGAGCGTTCT GTAAGCCGTT GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC GATAAAGGGG GTGAAAAACC CCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC GGGGCAGGGT GAGTCGACCC CTAAGGTGAG GCCGAAAGGC GTAATCGATG GGAAACAGAT TAATATTTCT GTACTTCCGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG CGTTGGTAGT CCGCGTTTAA GGTGGTAGGT GGGTGACTTA GGCAAATCCG GGTTGCTATA CACTGAGAGC TGATGACGAG GTCCTAAGGG ACTGAAGTAG TTGATGCCAT GCTTCCAGGA AAATCTTCTA AGCTTCAGGT TAGCGGGAAT CGTACCCCAA ACCGACACAG GTGGTCGGGT AGAGAATACC AAGGCGCTTG AGAGAACTCG GCTGAAGGAA CTAGGCAAAA TGGTACCGTA ACTTCGGGAG AAGGTACGCT CCTGTTGGTG ATGAGACTTG CTCTCTAAGC TGACGGGAGT CGCAGATACC AGGTGGCTGC AACTGTTTAT CAAAAACACA GCACTGTGCA AACTCGCAAG AGGAAGTATA CGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATTG GGTTATCGCA AGAGAAGCTC ATGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA TGGCCACGCT GTCTCCAGCC GAGACTCAGT GAAGTTGAAA TTGCGGTGAA GATGCCGTAT ACCCGCGGCT AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTGGCAC TGAACATTGA ACCTACATGT GTAGGATAGG TGGGAGACTA TGAAGTTGGG ACGCTAGTCC TGATGGAGTC GTCCTTGAAA TACCACCCTT GTAGTTTTGA TGTTCTAACC TAGACCCCTA ATCGGGGTTA GGGACAGTGC CTGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GCACGAAGGT TGGCTAAGTA CGGTCGGACA TCGTACGGTT AGTGCAATGG CATAAGCCAG CTTAACTGCG AGACATACAC GTCGAGCAGG TACGAAAGTA GGTCATAGTG ATCCGGTGGT TCTGAATGGA AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA GTCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTCAGAAC GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGGCGTTGG ATGATTGAAG GGAGCTGCTC CTAGTACGAG AGGACCGGAG TGGACGAACC GCTGGTGTTC GGGTTGTCAT GCCAATGGCA TTGCCCGGTA GCTACGTTCG GAATCGATAA CCGCTGAAAG CATCTAAGCG GGAAGCGAGC CCTAAGATGA GTCATCCCTA GGAATTTAAT TCCTCTAAAG AGCCGTTCGA GACTAGGACG TTGATAGGCA TGGTGTGTAA GCGTTGTGAG GCGTTGAGCT AACATGTACT AATGACTCGA GAGGCTTAAC CAT
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Protein sequence | |
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