| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_4002 |
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| Symbol | |
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| ID | 5081511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4656564 |
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| End bp | 4658189 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640501214 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001185504 |
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| Protein GI | 146295080 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000355464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCTC AACGCAATAT ATTGCTCATA GGACTACTGT TTGTCAGCTT TTTGCTGTGG
CAACAGTGGC AAGCAGACAA AGCTCCTAAA CCCGTTGCAA CAGAATCGTC CTTAGTGGCG
AATGTGGCTA GCACTCACAG TGCCGATGTT CCAGAAGCTG ATACAGGTGT ACCAGCAGCA
GTAGCTGCGA GTAAAAATCT TATCACAGTA AAAACTGATC AGCTTGATGT ACAAATCAAC
CCTGTAGGTG GCGACATCGT CTTTGCTGCA CTAGTTTCAC ACAAAATGGA GCAAGGTAAA
GAGCAACCTT TTGTATTGCT TGAGCAGACA AAAGATTACA CTTATATCGC CCAAAGCGGT
TTGATCGGTC GTGATGGTAT CGATAGCAGC GCCAACGGTC GTGCAGCATT CACAACCTCT
GCAACTGAAT TCACATTAGC CGAAGGCCAA GACACCTTAG AAGTGCCATT AACCTACGTG
GCCGATAATG GCGTAACTTA CACTAAAGTG TTTGTTTTCC ATCGTGGTAA GTTCAACGTA
GATGTTGACT ATAAAATCAA CAACACTTCA GCAGCACCGC TGCAAGTTCA GATGTACGGT
CAGATTAAAC AAACAATCAA GCCATCTGAA AGCAGTATGA TGATGCCTAC CTACCGTGGT
GGTGCGTTCT CAACAAATGA TGTGCGCTAC GAGAAATACA ACTTTGATGA CATGGCCAAA
AGCAACCTGA ACCAAGCCAC TTTAGGCGGT TGGGCAGCCA TGTTACAGCA CTATTTCGTT
TCAGCTTGGG TGCCACCCGC AACTGACAGT AACACTATTT TTTCAAGTGT CAGTGCTGGC
GGTTTAGCGA ATATTGGTTT CCGCGGTGCG GTATACGATA TCGCACCTGG TGCTAGCCAA
GAAATTAGCT CACAGTTCTA TGTTGGTCCT AAAGATCAAG CGGCACTATC CGCCATTTCA
GAAACCTTGA ACCTTGTCGT TGATTACGGT TTCCTATGGT GGTTAGCGGT ACCAATCCAC
TGGTTATTGA TGTTCTATCA ATCATTTGTG GGTAACTGGG GTGTAGCAAT TATCCTGATC
ACCTTAACCG TTCGTGGTTT ACTGTTCCCG CTAACAAAAG CGCAGTACAC CTCAATGGCT
AAGATGCGCA ATCTGCAACC TAAACTTGCC GACTTAAAAG AACGTTTTGG TGATGACCGT
CAGAAGATGG GTCAAGCTAT GATGGAACTG TATAAGAAAG AAAAAGTTAA CCCCATGGGT
GGCTGTTTAC CTATTATTTT ACAGATGCCA ATCTTCATTG CCTTGTACTG GGTATTGCTA
GAAAGTTTCG AACTACGTCA CGCTCCCTTT ATGTTATGGA TCCACGATTT ATCGGTACAA
GATCCTTACT ACATACTGCC GTTGCTGATG GGCGTATCTA TGTTCATCAT GCAGAAAATG
CAACCTATCG CACCGACGAT GGATCCAATG CAAGTGAAGA TGATGCAATG GATGCCAGTA
ATCTTTACCG TATTCTTCCT GTGGTTCCCA TCAGGTCTAG TACTATACTG GTTAGTAGGT
AACATTGTTG CCATCATCCA GCAGAAGATT ATTTATGCAG GTCTTGAGAA AAAAGGCTTA
AAATAA
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| Protein sequence | MESQRNILLI GLLFVSFLLW QQWQADKAPK PVATESSLVA NVASTHSADV PEADTGVPAA
VAASKNLITV KTDQLDVQIN PVGGDIVFAA LVSHKMEQGK EQPFVLLEQT KDYTYIAQSG
LIGRDGIDSS ANGRAAFTTS ATEFTLAEGQ DTLEVPLTYV ADNGVTYTKV FVFHRGKFNV
DVDYKINNTS AAPLQVQMYG QIKQTIKPSE SSMMMPTYRG GAFSTNDVRY EKYNFDDMAK
SNLNQATLGG WAAMLQHYFV SAWVPPATDS NTIFSSVSAG GLANIGFRGA VYDIAPGASQ
EISSQFYVGP KDQAALSAIS ETLNLVVDYG FLWWLAVPIH WLLMFYQSFV GNWGVAIILI
TLTVRGLLFP LTKAQYTSMA KMRNLQPKLA DLKERFGDDR QKMGQAMMEL YKKEKVNPMG
GCLPIILQMP IFIALYWVLL ESFELRHAPF MLWIHDLSVQ DPYYILPLLM GVSMFIMQKM
QPIAPTMDPM QVKMMQWMPV IFTVFFLWFP SGLVLYWLVG NIVAIIQQKI IYAGLEKKGL
K
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