Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3994 |
Symbol | |
ID | 5081477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4645739 |
End bp | 4646434 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640501206 |
Product | hypothetical protein |
Protein accession | YP_001185496 |
Protein GI | 146295072 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAATA AGCTATTAAA AATCAGTCTA TTCCTCTTAA TTGGACTATT AGGTTTTATC AGTGTCGATG TATTGGCCCA TGGGGTCGAT GACAATACCC GAGCCTTTTT AGAACAAAAC CAAGGGGTGC AATTTATTCC GTTTTTGTAT ATCGGGGCTA AGCATATGGT CACCGGATAC GACCACTTAC TATTTTTAGT GGGAGTGATC TTCTTTTTGT ACCGCAGCAA AGATGTGTTG TTGTATGTCA CCATGTTTAC TATTGGTCAC AGCACAACGT TGTTACTTGG CGTTATGACT GATGTTCAGG TCAATGCGTA TTTGATCGAT GCCATTATCG GCATATCAGT GATCTACAAA GGTTTTGATA ACTTAGGTGG TTTCAAGCGC TGTTTTAACT GGCAACCCAA TACCCAAATG GCAGTGTTGA TCTTTGGTTT GTTCCATGGC TTTGGACTGG CAACCAAATT ACAGGAATTT GAACTGTCAA AGGAAGGCCT GTTTACCAAT TTATTGGCAT TTAACATCGG GGTGGAGATC GGACAATTTG CTGCGTTGGC CTTTATTTTG ATAGTGATTA ACGCTTGGCG TCACTTTCCT TCATTTCAGC GATTTTCAAC GCTCACAAAC ACGGCACTCA TGAGTGCCGG GATCATGCTG ATGGGCTATC AACTAACTGG CTATTTTGTA AATTAA
|
Protein sequence | MPNKLLKISL FLLIGLLGFI SVDVLAHGVD DNTRAFLEQN QGVQFIPFLY IGAKHMVTGY DHLLFLVGVI FFLYRSKDVL LYVTMFTIGH STTLLLGVMT DVQVNAYLID AIIGISVIYK GFDNLGGFKR CFNWQPNTQM AVLIFGLFHG FGLATKLQEF ELSKEGLFTN LLAFNIGVEI GQFAALAFIL IVINAWRHFP SFQRFSTLTN TALMSAGIML MGYQLTGYFV N
|
| |