Gene Sputcn32_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3994 
Symbol 
ID5081477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4645739 
End bp4646434 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content41% 
IMG OID640501206 
Producthypothetical protein 
Protein accessionYP_001185496 
Protein GI146295072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA AGCTATTAAA AATCAGTCTA TTCCTCTTAA TTGGACTATT AGGTTTTATC 
AGTGTCGATG TATTGGCCCA TGGGGTCGAT GACAATACCC GAGCCTTTTT AGAACAAAAC
CAAGGGGTGC AATTTATTCC GTTTTTGTAT ATCGGGGCTA AGCATATGGT CACCGGATAC
GACCACTTAC TATTTTTAGT GGGAGTGATC TTCTTTTTGT ACCGCAGCAA AGATGTGTTG
TTGTATGTCA CCATGTTTAC TATTGGTCAC AGCACAACGT TGTTACTTGG CGTTATGACT
GATGTTCAGG TCAATGCGTA TTTGATCGAT GCCATTATCG GCATATCAGT GATCTACAAA
GGTTTTGATA ACTTAGGTGG TTTCAAGCGC TGTTTTAACT GGCAACCCAA TACCCAAATG
GCAGTGTTGA TCTTTGGTTT GTTCCATGGC TTTGGACTGG CAACCAAATT ACAGGAATTT
GAACTGTCAA AGGAAGGCCT GTTTACCAAT TTATTGGCAT TTAACATCGG GGTGGAGATC
GGACAATTTG CTGCGTTGGC CTTTATTTTG ATAGTGATTA ACGCTTGGCG TCACTTTCCT
TCATTTCAGC GATTTTCAAC GCTCACAAAC ACGGCACTCA TGAGTGCCGG GATCATGCTG
ATGGGCTATC AACTAACTGG CTATTTTGTA AATTAA
 
Protein sequence
MPNKLLKISL FLLIGLLGFI SVDVLAHGVD DNTRAFLEQN QGVQFIPFLY IGAKHMVTGY 
DHLLFLVGVI FFLYRSKDVL LYVTMFTIGH STTLLLGVMT DVQVNAYLID AIIGISVIYK
GFDNLGGFKR CFNWQPNTQM AVLIFGLFHG FGLATKLQEF ELSKEGLFTN LLAFNIGVEI
GQFAALAFIL IVINAWRHFP SFQRFSTLTN TALMSAGIML MGYQLTGYFV N