Gene Sputcn32_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3979 
Symbol 
ID5081462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp4626756 
End bp4627382 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID640501191 
Productresolvase domain-containing protein 
Protein accessionYP_001185481 
Protein GI146295057 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTC GAGCTTACCT TCGCGCATCA ACCAAAGAAC AAAATGCTGA ACGGGCACGT 
GAATCACTCA TTCAGTTTGC TGCTCAGCAT GGTCAGCGAA TCGCCGCTTT TTATATCGAG 
AATGTTTCTG GTGCAACGTT GCACCGACCT GAGTTGATGC GTTTGATTGC CGAGTCAGGC 
GAGGGTGACA TTGTGCTAGT TGAACAAATC GACCGTCTGG CACGGCTCAA GCAAAGTGAT 
TGGGATACGT TGAAACAAAA GTTGGCCAGC AAACACTTAG CCATTGTTTC ACCAGAACTT 
CCCACCAGTT GGCTGGCTTT GCAACAACAT AGCGAAACTG ACTTTACCGG TGCTATTTTA 
CAGGCGGTGA ATGCCATGAT GTTGGATATG CTCGCGGCGG TTGCCCGCAA AGATTATGAT 
GACCGGAGAC GTCGTCAATC ACAGGGGATT ACAAAAGCTA AATCCGATGG AAAATACAAT 
GGGCGCCAGC CTGATCTGAA ACGGCATCAG CACATAGCCA GCCTATTGAA GACTGGGCAT 
AGCTATAGTG ACATTCAGGA CATGTTGGGA TGTTCGCGGC ACCTGATTGC AACTATCTCG 
AAGAATATCG GTAGTATAGA GCAGTAA
 
Protein sequence
MFIRAYLRAS TKEQNAERAR ESLIQFAAQH GQRIAAFYIE NVSGATLHRP ELMRLIAESG 
EGDIVLVEQI DRLARLKQSD WDTLKQKLAS KHLAIVSPEL PTSWLALQQH SETDFTGAIL 
QAVNAMMLDM LAAVARKDYD DRRRRQSQGI TKAKSDGKYN GRQPDLKRHQ HIASLLKTGH 
SYSDIQDMLG CSRHLIATIS KNIGSIEQ