| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3969 |
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| Symbol | |
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| ID | 5081452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4615637 |
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| End bp | 4617190 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640501183 |
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| Product | TGF-beta receptor, type I/II extracellular region |
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| Protein accession | YP_001185473 |
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| Protein GI | 146295049 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTC CTGTTCATGC GCCACAGTGG CCACGTCAAA TCCCTTACAT TATTGCCAGT
GAAGCTTGCG AGCGTTTCAG CTTTTACGGT ATGAGAAATA TTCTAACACC ATTCCTTATG
ACGGCGCTGT TGCTGTCTAT CCCTGAAGAT CTTCGTGGGG CAGTCGCTAA GGATGTATTC
CATTCATTTG TTATAGGGGT CTATTTTTTT CCGCTACTAG GAGGCTGGAT TGCGGATCGT
TTTTTCGGTA AGTACAACAC GATTCTGTGG TTGAGTTTAC TTTATTGTGT TGGTCATGCT
TTTTTGGCCA TCTTTGAACA CAGTATTCAA GGGTTTTATA CGGGATTATT TTTGATCGCA
TTAGGGTCGG GTGGTATTAA ACCCTTAGTT TCTTCCTTTA TGGGTGATCA GTTTGATCAA
ACGAACAAAT CATTAGCACA AAAAGCGTTT GATATGTTTT ATTTTACGAT TAATTTTGGA
TCCTTTTTTG CCTCATTATC TATGCCGCTT CTATTAAAAA ACTATGGGGC TGCTGTTGCA
TTTGGGATCC CAGGAATATT GATGTTCATC GCTACAGTAT TCTTCTGGTT AGGTCGCAAG
CGTTATGTGC ATATGCCACC CGAACCTAAA AATCCCCATG GTTTCTTACC TGTTATTCGC
ACTGCATTAC TGACTAAAGT GGCTGGCCAA GCGAATGTTG GGCTAGTTTT AGCGTTAATT
GGGTGTATTT CTGCTGCCTA TGCTTTAGTG AATATTCCAA CACTGGGGAT TGTTGCAGGT
TTATGTAGTG CGCTTGTACT ACTGATGGGA TTCACGGGTG TTGGTGCTTC GTTGCAACTT
GAGCGTGCCA GAGGGATACA TCCTGATATT GCGGTTGATG GTGTGCGCTC GGTGTTACGT
ATTTTAGTGC TATTTGCTTT AGTTACGCCG TTTTGGTCCT TGTTTGATCA AAAGGCTTCA
ACTTGGATTT TGCAGGCCAA TGATATGTCT AAACCTCAAT GGTTTGAACC TGCGATGATG
CAAGCATTGA ATCCATTATT AGTCATGTTA CTGATCCCAT TTAATAATTT TGTGCTGTAT
CCAGCTATTG AGCGCATGGG GATAAAGTTA ACTGCACTGC GTAAAATGGG GGCGGGTATC
GCGATCACTG GTTTAAGTTG GATTGTGGTA GGGAGCATTC AATTAGTCAT GGATGGAGGA
TCGGTGCTCT CTATTTTTTG GCAAATTTTA CCTTATGCTC TTCTAACATT TGGCGAGGTA
TTAGTTTCTG CTACTGGATT AGAATTTGCC TATAGCCAAG CCCCAAAGGC TATGAAAGGT
ACTATTATGA GTTTTTGGAC TTTGTCGGTT ACTGTCGGTA ACTTATGGGT ATTACTTGCT
AATGTTAGTG TAAAAAGTCC GGCGGTCACT GAACAAATAG CTCAAACAGG GATCAGCATT
ACTGCTTTTC AGATGTTTTT CTTCGCAGGT TTTGCCATCT TGGCGGCATT GATATTTGCG
CTTTATGCTA GATCCTACCA GATGCAAGAT CACTATCGCC AAGTTGAATC TTAA
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| Protein sequence | MTTPVHAPQW PRQIPYIIAS EACERFSFYG MRNILTPFLM TALLLSIPED LRGAVAKDVF
HSFVIGVYFF PLLGGWIADR FFGKYNTILW LSLLYCVGHA FLAIFEHSIQ GFYTGLFLIA
LGSGGIKPLV SSFMGDQFDQ TNKSLAQKAF DMFYFTINFG SFFASLSMPL LLKNYGAAVA
FGIPGILMFI ATVFFWLGRK RYVHMPPEPK NPHGFLPVIR TALLTKVAGQ ANVGLVLALI
GCISAAYALV NIPTLGIVAG LCSALVLLMG FTGVGASLQL ERARGIHPDI AVDGVRSVLR
ILVLFALVTP FWSLFDQKAS TWILQANDMS KPQWFEPAMM QALNPLLVML LIPFNNFVLY
PAIERMGIKL TALRKMGAGI AITGLSWIVV GSIQLVMDGG SVLSIFWQIL PYALLTFGEV
LVSATGLEFA YSQAPKAMKG TIMSFWTLSV TVGNLWVLLA NVSVKSPAVT EQIAQTGISI
TAFQMFFFAG FAILAALIFA LYARSYQMQD HYRQVES
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