Gene Sputcn32_3967 details

Gene Information

• Locus tag: Sputcn32_3967
• ID: 5081450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4612687
• End bp: 4614576
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640501181
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001185471
• Protein GI: 146295047
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.896627
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTTGGTG GTGGTCATGC CGGAACTGAA 
GCCGCATTAG CAGCTGCAAG AATGGGCTCA AAAACATTAT TACTAACGCA TAATATTGAT 
ACGTTAGGAC AAATGTCATG TAACCCAGCA ATTGGTGGTA TCGGTAAAGG TCATTTAGTA 
AAAGAAATTG ATGCTTTAGG CGGTGCAATG GCGATCGCAA CCGACTATGC TGGGATCCAA 
TTTCGTACCT TAAACTCAAG CAAAGGCCCC GCCGTTAGAG CGACACGAGC TCAAGCTGAC 
CGTGCTTTAT ATCGTCAAAA AATCCAAAAT ATACTGCAAA ATCAAGCTAA TTTACGGATA 
TTTCAACAAG CTGTAGATGA TTTGATTGTC GAAAACGATC GTGTTGTTGG TGTTGTTACT 
CAAATGGGTT TAGCCTTTGA ATCACCAGCA ATAGTGTTGA CAACTGGTAC ATTTTTAAGC 
GGAAAAATCC ACATAGGTCT AGAAAACTAC AGTGGAGGTC GTGCTGGCGA TCCACCTGCG 
ATAGCCTTAG CAAATCGTTT ACGTGAATTA CCTATTCGTG TTGGTCGTTT AAAAACCGGC 
ACTCCACCAC GTATTGATGC AAATACTATT GATTTTTCGC AAATGGCAGA ACAAAAAGGT 
GATTCTCCAT TACCCGTAAT GTCATTTATG GGGGATGTAA GCCATCACCC TAAACAAATT 
TCTTGCTGGA TCACCCATAC CAATGAAAAA ACCCATGAAA TTATTCGTGG TGGTTTAGAC 
AGAAGTCCTA TGTATTCAGG TGTTATTGAA GGTATTGGTC CACGTTATTG CCCTTCAATT 
GAAGATAAAA TTCATCGTTT TTCAGATAAA TCTTCACATC AGATCTTTAT CGAACCAGAA 
GGGCTAAATA CGACAGAAAT CTACCCTAAC GGGATTTCGA CCAGCCTCCC CTTTGATGTA 
CAGTTGAATT TAGTTCGCTC AATCAAAGGG ATGGAAAATG CAGAAATTGT CCGTCCAGGA 
TATGCAATAG AATATGATTA TTTTGATCCA CGAGATCTTA AAAACTCATT AGAAACAAAA 
ACGATCAATG GTTTATTTTT CGCTGGTCAA ATTAATGGCA CAACGGGATA TGAAGAAGCT 
GCTGCTCAAG GCCTATTAGC AGGGATGAAC GCTTCATTGC AGGTTCAGGG CAAAGATGCT 
TGGTGCCCAC GCCGTGACGA AGCGTATCTT GGGGTGCTAG TTGATGATCT ATCGACTCTA 
GGGACCAAAG AACCGTACCG CATGTTTACT AGCCGTGCGG AATACCGTTT GTTACTCCGT 
GAAGATAACG CTGATATTCG CTTAACGGCA AAAGGTCGTG AATTAGGTTT AGTGGATGAC 
ATTCGCTGGG CGGCATTTAG TGAAAAATTA GAGTCGATTG AACTTGAGTT ACAACGTTTA 
CGTGCTCAAT GGGTGCATCC AAATTCACCT TTGATCCATG CATTAAACCC ACACTTGAAT 
ACGCCGATCT CTCGCGAAGC GTCATTTGAA GAATTACTGC GTCGTCCAGA AATGGATTAC 
AGCAAGTTGA TGCAGATCGA AGGTTTTGGT CCAGGACTTG AAGATCCACT GGCCGCTGAA 
CAAGTACAAA TCCAAGTAAA ATACTCTGGT TATATTCAGC GTCAGCAAGA AGAGATTAAT 
AAAGCCGTAC GTAATGAAAA CACAGGTTTA CCATTACACC TTGATTATAA AGAAGTTCCT 
GGTTTATCAA ATGAAGTTAT CGCTAAATTG AATAGCCATA AACCTGAAAC GATAGGTCAA 
GCATCAAGGA TCTCTGGAGT CACTCCAGCA GCAATTTCAA TTTTACTTGT GCATCTTAAA 
AAGCGTGGCT TATTACGTAA GAGCGCGTAA 

 

Protein sequence

MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQANLRI 
FQQAVDDLIV ENDRVVGVVT QMGLAFESPA IVLTTGTFLS GKIHIGLENY SGGRAGDPPA 
IALANRLREL PIRVGRLKTG TPPRIDANTI DFSQMAEQKG DSPLPVMSFM GDVSHHPKQI 
SCWITHTNEK THEIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFSDK SSHQIFIEPE 
GLNTTEIYPN GISTSLPFDV QLNLVRSIKG MENAEIVRPG YAIEYDYFDP RDLKNSLETK 
TINGLFFAGQ INGTTGYEEA AAQGLLAGMN ASLQVQGKDA WCPRRDEAYL GVLVDDLSTL 
GTKEPYRMFT SRAEYRLLLR EDNADIRLTA KGRELGLVDD IRWAAFSEKL ESIELELQRL 
RAQWVHPNSP LIHALNPHLN TPISREASFE ELLRRPEMDY SKLMQIEGFG PGLEDPLAAE 
QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLHLDYKEVP GLSNEVIAKL NSHKPETIGQ 
ASRISGVTPA AISILLVHLK KRGLLRKSA