| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3966 |
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| Symbol | gidB |
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| ID | 5081449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4611949 |
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| End bp | 4612569 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640501180 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001185470 |
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| Protein GI | 146295046 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.181169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTATCAG CCCAGTTAGA GGCTTATTTA GCCGAAATTA ATCTGTCCGC TACAGCGGAG
CAGAAAAAAC AACTAATTGA TTTTGTTGGC ATGCTCAACA AGTGGAATAA AGCCTACAAT
CTGACATCTG TGAGAGATCC TGAGGCTATG CTTGTCCGTC ATATTATGGA TAGCTTAGTC
GTGTCAAAGC ATTTACAGGG GGAACGCTTT ATCGATGTTG GTACTGGCCC TGGTTTACCT
GGTATTCCTT TAGCGATTAT GAATCCAAAT AAAACCTTTG TGTTGCTCGA TAGCTTAGGA
AAACGTATTC GTTTTCAAAA ACAAGTGGCC TTTGAATTAG GGATCCGCAA TATCAGTTCA
GTTGAAAGCC GTGTCGAAGC CTATCAAGCT GAACAACAAT TTGATGGTGT ACTGAGTCGC
GCTTTTGCAT CCATTCAAGA TATGCTGAGT TGGTGTCATC ATTTACCTGC TGAGAATGGG
CTGTTTTATG CGTTAAAAGG CCAATTGAAC GACGAAGAAT TGCAACAAAT GCCCAGCGGA
TTTGTTATTA AAGAAATCAT CGAACTTAAA GTACCAAAAC TCGATGAACA GCGTCATTTA
TTAAAGATTA TCAAAGAATA A
|
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| Protein sequence | MLSAQLEAYL AEINLSATAE QKKQLIDFVG MLNKWNKAYN LTSVRDPEAM LVRHIMDSLV
VSKHLQGERF IDVGTGPGLP GIPLAIMNPN KTFVLLDSLG KRIRFQKQVA FELGIRNISS
VESRVEAYQA EQQFDGVLSR AFASIQDMLS WCHHLPAENG LFYALKGQLN DEELQQMPSG
FVIKEIIELK VPKLDEQRHL LKIIKE
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