Gene Sputcn32_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3959 
Symbol 
ID5081442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp4607418 
End bp4607951 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content45% 
IMG OID640501173 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001185463 
Protein GI146295039 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.307164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAT TAACTACCAT CGCTCGCCCT TACGCAAAAG CAGCTTTTGA CTTTGCTATT 
GAACACAATG CAGTGGATAA CTGGGCTGAA ATGCTCACGT TTGCCGCGCT GGTAAGTGAA 
AACGAAACCA TGCAGCCCCT GCTTAATGGC GCTTTAGCCA ATACAAAACT TGCTGCACTT 
TTTATTAATG TGTGTGGTGA GCAAATCAAT AAGCAAGGTC AAAACTTGAT AAAGGTAATG 
GCTGAAAACG GTCGCTTGAG TGTTCTACCT ACGGTATCGA AATTATTTTC AGATTTCCGT 
AATGAGTGGG CAAAAGAAGT TGAAGCTAAT GTGGTTTCGG CAACTGAGCT TAGCTTAGAA 
CAACAGCAGC ATATTAGTGT TTCTCTAGAG AAACGTCTCG CACGCAAAGT TAAGCTGAAT 
TGCAGCACGG ACACCGCGCT TATCGCCGGT GCAATTATTC AGGTGGGTGA TCTGGTCATT 
GATGGCTCGG TCCGCGGTAA ATTATCGCGC CTGTCTGATA CGCTGCAGTC GTAA
 
Protein sequence
MAELTTIARP YAKAAFDFAI EHNAVDNWAE MLTFAALVSE NETMQPLLNG ALANTKLAAL 
FINVCGEQIN KQGQNLIKVM AENGRLSVLP TVSKLFSDFR NEWAKEVEAN VVSATELSLE 
QQQHISVSLE KRLARKVKLN CSTDTALIAG AIIQVGDLVI DGSVRGKLSR LSDTLQS