| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3953 |
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| Symbol | |
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| ID | 5081436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4599117 |
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| End bp | 4601222 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640501167 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001185457 |
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| Protein GI | 146295033 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000731032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATTTA AATATTCAAT CGTAGGTCTT GCTGTTGGCG CAGCATTAAT GGCTATGCCT
GTTTTAGCTG ATGATGCAAC AGATGCCAAT ATTGAACGTA TTAAAGTCAC TGGCCGTACT
TTTAACGACT ATAAAGTGGG TTCTGCATCG GGTGCTATGC GTGGTGATAT CAACTTAATG
GATACTCCAC AGTCCGTTAA TGTTATCCCC GATTTTGTTA CAGATGAACA GTTAGCCACT
AACCTCGCTG AAGTCTTAGT CAACGACTCA AGCGTAACTG CTGGTACAAC GCGTTGGAAC
CGCCAAGTCT TTAGTATCCG TGGTTTCGAG ATTGATTCCG GTAATGGTTA TCTTATCAAT
GGCCATCAGC AGTGGTCTCA CTATGTACAA CCTATTGAAA CCCTACAGCA AGTTGAGGTG
TTAAAAGGCC CTTCTAGCAT GCTTTATGGT CAGTCTGGTC CTGGTGGTTT AGTGAATATG
GTCACTAAAA AGCCTACCTA TGACTCCATG TTGGATCTTG GTTTTGATAC CGATGGCTAC
GGCTCAACCC GCGCACAATT AGACGCTGGT GGCAGCTTAA ATGATGCTCA AAGTATTCGT
TACCGTGGTG TGTTAGTGAA ACAAGACACT AAATACTGGC GTGAGTATTC GACCACTGAA
GAAAACCAAG AGCGTGACCG TTGGTTAGGT TACCTAAACC TAGAGTTTGA TGTCAGCGAC
GATGTTACTC TGTCGGTTAA ATACGATCAT ACCCAAGATA AAGCGGGTAT TGATGCTGGT
GGTTGGCTAG ATGCTCAAGG TAATGTGATA GGTGGACGTA AAACCGTTTG GGATGCGCCA
TGGGCCTTTA CTGATAATAC TATTTCAAAT TTAGGTGCCG ATATTACTTG GCAAATGACT
GACGATTGGA AAGTTAAAGT AGGTTATAAC GATCAACAAT TTGACCGTCA ACGTTTCGAT
TCTGCGCCTG TTTATACGGC AGATCCTTTC ACAAATGGTT ATCGGATCAG CCCATTTGAT
CGTTACGATG ATTGGCAACA TAAAACGGCT TTTGTGGACT TTACAGGTGA GTTTTCTTTA
GCAGGTATGG AGCATCAATT CCTTATTGGT GCTAACTACT TAGACTATTT CTACCAACAG
CAAATTAAGC GTGGCACAGC ACAAACCGTC ATTCCTGGGC AAGTGGTGAT TAAGCCAGAG
CTTGATTACC ATCAAGGAAA CTTGAGTATT CCAAGTGAAT ACAAATATTA CGGTTTCTAT
CTGCAGGATT TAATGACCTT AAATGAACAA TGGAAATTGC TTGCTGGTGT GCGTTATGAC
GAGCAGAAGA AAGATGGTGT AGGCGGCAAC AGTTATGCCG TATCGCCTAA GTTTGGGGTG
ATCTACTCAC CAATGAGCAA TGGTAGTATT TACGTTAACT ATTCAAAAAG CTTCGCACCA
AAAGGTTCTG TCACCAGTTC TGAAGATGTT AATGAAGGTG ATAACCTTAA GCCTGAGTAT
GGAACTCAAT ATGAATTAGG GACTAAGTGG GAGTTATTTA ATGATAGCTT ACTATTAACT
GCTGCTGTGT TTGATATTAC GGTTTCAAAC GTTGTCATTG AACTTGACAG CCCTATACCG
AGTAAAAAAA CAATGACAAC CCAAGGTGGT GAGCAACATC ACCGTGGCTT TGAAATTGGT
GCCCAAGGTC AGTTAGGTGA TAGCTGGTTT GTGACTTCAT CTATGATGTA TTTAGATGCG
GAATATAATA CTGGTGCAGG CAAAATCGGT GGCAAGAGCT TAGATGGTAA AACCCCTATT
GATGCTCCTG AGTGGTCAGC CAATATTTGG ACTCGCTATG AAGTGACAGA CAACTTTGCG
ATGAACTTTG GTGCTATCTA TGTCGGAGAG CGTTTTGCTG ATGATGTAAA TACTATCACC
AAAGATGGCT ATGTACGTTT TGATATCGGT GCGGCCTACA CTATGGATAT CATGGGTAAA
GATGTGAGCC TTCGCGCCAA CGTCAGAAAC CTCTTTGATA CTGAGTACCT AGACGGTGGC
AGTGATAGAA TGGTCACTAT CGGCCAAGAC CGTAACTTCA GTGTTGCTGT TGAAGCTAAG
TTCTAA
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| Protein sequence | MVFKYSIVGL AVGAALMAMP VLADDATDAN IERIKVTGRT FNDYKVGSAS GAMRGDINLM
DTPQSVNVIP DFVTDEQLAT NLAEVLVNDS SVTAGTTRWN RQVFSIRGFE IDSGNGYLIN
GHQQWSHYVQ PIETLQQVEV LKGPSSMLYG QSGPGGLVNM VTKKPTYDSM LDLGFDTDGY
GSTRAQLDAG GSLNDAQSIR YRGVLVKQDT KYWREYSTTE ENQERDRWLG YLNLEFDVSD
DVTLSVKYDH TQDKAGIDAG GWLDAQGNVI GGRKTVWDAP WAFTDNTISN LGADITWQMT
DDWKVKVGYN DQQFDRQRFD SAPVYTADPF TNGYRISPFD RYDDWQHKTA FVDFTGEFSL
AGMEHQFLIG ANYLDYFYQQ QIKRGTAQTV IPGQVVIKPE LDYHQGNLSI PSEYKYYGFY
LQDLMTLNEQ WKLLAGVRYD EQKKDGVGGN SYAVSPKFGV IYSPMSNGSI YVNYSKSFAP
KGSVTSSEDV NEGDNLKPEY GTQYELGTKW ELFNDSLLLT AAVFDITVSN VVIELDSPIP
SKKTMTTQGG EQHHRGFEIG AQGQLGDSWF VTSSMMYLDA EYNTGAGKIG GKSLDGKTPI
DAPEWSANIW TRYEVTDNFA MNFGAIYVGE RFADDVNTIT KDGYVRFDIG AAYTMDIMGK
DVSLRANVRN LFDTEYLDGG SDRMVTIGQD RNFSVAVEAK F
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