Gene Sputcn32_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3947 
Symbol 
ID5081430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4591976 
End bp4592803 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content47% 
IMG OID640501161 
Producttransposon Tn7 transposition protein TnsA 
Protein accessionYP_001185451 
Protein GI146295027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA GTTACAAAGG TCTGTCCGAC CAGCAAATCC AGAAGCGTAT TAAAGAAGGC 
CGAGGGCAAG GCGAAGGCCG AAGCTACAAG CCTTGGATTC AAACCTGGGA TGTGTCTTCA
CTGGGCCGGT CTCATCGTAT TTTCGGCAAC CGTAGTCATC GGTTGCATCA CCTGCTTTCT
GATCTGGAAC TCGCTATATT TCTGACGCTG GACTGGCAGC ACTCTGTGCT AGATATCCGA
GAACAGTTTC CGCTGCGTGT TGAAGATACT ACCCGTCTTG CTGATGAGCT CGGTATTAGC
CATGCCGTCT TTAAGGGCGC ACCCCAAGTG TTGAGCTCAG ACTTTTTGGT TACATTCGAC
CGACAAACGC AACCCTTAAT GGCGTTTCAG GCTAAATACA GCACTGATTT ATCCAAACCT
GAAGTGATTG AACGGTTGCA ACTGGAAAAA CGCTACTGGG ACGATAAACA GATACCATGG
GCTATCATCA CTGAGAAGGA AATCAGCAAA GAGGTGGTGA TGAATATTCA GTGGCTTTAT
CCTGCAGAAA GCGAAAAGGT TGCTGAAGAC GAGTTGCACC ACCAATTCCT GCTGTTTCAA
ACCCAGTTTG GTAAACAACC CAACGACTCA ATCATCAAAA TAGCTCAGCA GTTAGACCTT
GCCTATAACC AGGAACCCGG TCAGGCATTG TTCTGGTTGC GTCATCTGCT GGCCAGACGT
TATTTCCAGT TTGATATTAA TCTGCCCTAC CGAAAGTTAA TTGCAGCAAA TCTCATCGCT
ACTACCTTTG AAAAGGAGAT CACGGAGGCC AACTATGTTT CCGGTTAA
 
Protein sequence
MAGSYKGLSD QQIQKRIKEG RGQGEGRSYK PWIQTWDVSS LGRSHRIFGN RSHRLHHLLS 
DLELAIFLTL DWQHSVLDIR EQFPLRVEDT TRLADELGIS HAVFKGAPQV LSSDFLVTFD
RQTQPLMAFQ AKYSTDLSKP EVIERLQLEK RYWDDKQIPW AIITEKEISK EVVMNIQWLY
PAESEKVAED ELHHQFLLFQ TQFGKQPNDS IIKIAQQLDL AYNQEPGQAL FWLRHLLARR
YFQFDINLPY RKLIAANLIA TTFEKEITEA NYVSG