Gene Sputcn32_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3940 
Symbol 
ID5081373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4580323 
End bp4581363 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content49% 
IMG OID640501154 
Productintegrase catalytic subunit 
Protein accessionYP_001185444 
Protein GI146295020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCATA CTAACAATCC GATAATTAAA CACAAGGCTG GGCTGCTGAA TTTAGCTCAG 
GAGCTTAATA ACGTCTCAAA AGCCTGCAAG GTTATGGGCG TGTCACGGGA TACGTTTTAC
CGCTATCAGG AGCTTGTTGC TGAAGGTGGC GTTGATGCTC TCATCGATAA AAGCCGCAGA
GCGCCGAATC TCAAGAATCG AGTGGATGAA ACCATCGAGA AAGCGGTTAT TGATTATGCT
ATCGGGTATC CGGCTCATGG CCAGCATCGA ACCAGTAATG AGCTACGTAA ACAAGGCGTG
TTCGTCTCTG GCAGCGGTGT TCGCTCTGTC TGGCTACGAC ACGACTTGGA GAACTTCAAG
AAACGCTTAA AAGCGCTGGA AGCAAAGGTT GCGAAGGAAG GTATTTTACT GACTGATGCG
CAGATTGCCG CGCTTGAGAA GAAAAAACAT GACGATGAAG CCTGCGGTGA GATTGAGACT
GCCCACCCAG GTTACCTGGG CTCGCAGGAT ACGTTTTATG TCGGCAACCT GAAGGGCGTT
GGCCGGATTT ACCAGCAAAC CTACGTCGAT ACTTACAGCA AAATCGCACA TTGTAAGCTG
TATACCACCA AGACGCCGAT CACAGCAGCA GACTTACTCA ACGACAAAGT GCTGCCATTC
TACGAGGCTC AGGGCTTGCC TGTGCTGCGT ATTCTGACTG ACCGGGGTAC AGAATACTGT
GGCAAAGTAG AACAGTACGA CTACCAGCTG TATCTGGCGA TCAACGACAT TGACCACACT
AAAACTAAAG ACATGTCGCC GCAAACGAAC GGGATCTGCG AACGGTTCCA CAAGACGATA
TTGCAGGAGT TCTATCAGGT TACGTTCCGT AAAAAGCTCT ATGGCGACCT GGCAGAGCTA
CAAAAAGATC TGGACGAATG GCTGGTTTAT TACAACAATG ACCGAACTCA TCAGGGCAAG
ATGTGCAATG GCAGAACGCC AATGGATACT TTGCTGGATG GAAAGCAGGT TTGGGTGCAG
AAGAATCTGA CTCAAATCTA A
 
Protein sequence
MLHTNNPIIK HKAGLLNLAQ ELNNVSKACK VMGVSRDTFY RYQELVAEGG VDALIDKSRR 
APNLKNRVDE TIEKAVIDYA IGYPAHGQHR TSNELRKQGV FVSGSGVRSV WLRHDLENFK
KRLKALEAKV AKEGILLTDA QIAALEKKKH DDEACGEIET AHPGYLGSQD TFYVGNLKGV
GRIYQQTYVD TYSKIAHCKL YTTKTPITAA DLLNDKVLPF YEAQGLPVLR ILTDRGTEYC
GKVEQYDYQL YLAINDIDHT KTKDMSPQTN GICERFHKTI LQEFYQVTFR KKLYGDLAEL
QKDLDEWLVY YNNDRTHQGK MCNGRTPMDT LLDGKQVWVQ KNLTQI