| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3939 |
|---|
| Symbol | |
|---|
| ID | 5081372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 4578385 |
|---|
| End bp | 4580286 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640501153 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_001185443 |
|---|
| Protein GI | 146295019 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTTGTG TCAGAAAAAA TGATAGATTT TCTGACATGA GTATTACGAC TTCAATTAGA
AACTGGTTGT TGACAAAGGC AGACGGTTAC GTTTTCTGTT GTCGAGAACT ATTATGTTAT
GGGTCCAGAG ATTCCATAGA TAAGTGCCTT AGCAGACTAT GCCAAGCTGG CTCAATTGAG
AGATTAGCAA GAGGTATTTA TAAAATATCC TCCTTCGATT CTAGCAAAAG CAGTCATGAC
GTCGTCACAC ATGTTGTGTC CGCCATAAGC AGAACTCAAA ATCTTCCGAT ACACAATAAT
GGATATTTGT CATATGAAGA ACTATGTAAG TCTGAATATG ACAATAGTTA TTCATTGATT
GACAGAGATA AAATTTACAC AGAGTATTGG TGGGCGGGAA ATACAAAAAA TATTAACGTT
AAAGGCCATC AAATCCGAAT TAAAAAAGTT AGTCCGAGGA AATTAGCACA AAATAAAGGC
AATGTAGGCT TGGCAATTTC TTCTGTCTGG GCTCTAGGTA AGGAACGTCT GACTAACGAA
GTTGTTAAGA ATATAATATT TAATTTATCT AGCGATGAGC AAAATGATTT AAAAAACTCT
CTTGGATTCA TGCCATCTTG GGCATCTGAT ATTTTCTTGA AAGTTATGCA GGATTTAGAA
TGTTTCAAGC CGCATTTTCA AAGCATCTCC AATACCGCAT GTTCAGTTAT CGACAACGAC
ATAACCAGCG AAGATCATCT TGATTATAAA TGGACGACGG GGACAGTTGA GGGGCGATGG
AGTGGTTTTG GACCATACTA TGCAATGTTC CCGGTTGACT TTGCTAGAAA AGTTATAACC
AAATACTGTC CTGTAGGAGG GGTAGTTTTA GATCCATTCT GTGGTAGAGG TACAGTGCCT
TTCGTGTCGA TGGCAACGGG AAGATATGCC ATAGGCTGCG ATATTAATCC TGTAGCCTGG
CTTTATGCAA AGGTCAAAAC TGATCCATAT ATTAAACACC AGCTCTTAAT TAAGCGGGCG
AGAGAAATTC AGAGTATGGT GTCGTATGAC GACATGCAGC CAGAGAACGA ATTTCAACAG
TATGCTTGGT CTCCAGCAGT ATTAGGTTTT TTGAATGTAG CAAGAAGAGA ACTGGATTGG
AAGAACTCTA ATCTTGACCG CTCTTTGATG GGGACTTTGT TAGTGCACTT GCATGCTAAA
CTTGGCGATG GCTTATCAAA TCAACTTCGT CAATCAAAGG CTATGGCTCC AGATTACTCT
GTCCGTTGGT GGAAATCAAA ATGTATGCAA CCACCGAACA TTGACATCGT TAATTTTATA
TCTCAACGAT TGGAATGGAG ATATAAATTC GGAATAGTGC AACCTGCCGA AGGAATTAGA
AAGCCACAAA TACTACTGGG CGACAATAGA CAACTATTGT CCAAGTACAG AAATAAGCAA
AAAGCAGATT TGATTCTCAC ATCACCTCCT TACTACGGCG TAACAAACTA TAGGTACGAT
AACTGGATAA GGCTTTGGCT ACTTGGCGAA GGTAGCTCGC TGCCAGATAG TGACTCTTGG
GCTAGACATA GTGATAGAAG TGAGTACTTC AAGTTACTGA AAGAAACATT TTATCATTGC
AAAAAAAGAG CAAAAGCAGA TGCTGTAATA TATGTCAGGA CGGATGCTAG AAAATTCACT
TTAGAAACTA CAATCAAAAT TTTAAAAGAA ACTTGGCCAG ATAAAGATCT CTTTTATTCT
TATGATGGAT TCAAAAAAGC TACCCAAACA GCTTTATTTG GAGATAAAAA CGAAAAGCCA
GGGGAATTTG ACCTTATTCT TCTTCCGCAA GGCCAAAAAC CTAAAGACTC CATGAGAATT
TTTGATGGTA AACTACCATT AAATGTACTA GCTCAGACTT GA
|
|---|
| Protein sequence | MFCVRKNDRF SDMSITTSIR NWLLTKADGY VFCCRELLCY GSRDSIDKCL SRLCQAGSIE
RLARGIYKIS SFDSSKSSHD VVTHVVSAIS RTQNLPIHNN GYLSYEELCK SEYDNSYSLI
DRDKIYTEYW WAGNTKNINV KGHQIRIKKV SPRKLAQNKG NVGLAISSVW ALGKERLTNE
VVKNIIFNLS SDEQNDLKNS LGFMPSWASD IFLKVMQDLE CFKPHFQSIS NTACSVIDND
ITSEDHLDYK WTTGTVEGRW SGFGPYYAMF PVDFARKVIT KYCPVGGVVL DPFCGRGTVP
FVSMATGRYA IGCDINPVAW LYAKVKTDPY IKHQLLIKRA REIQSMVSYD DMQPENEFQQ
YAWSPAVLGF LNVARRELDW KNSNLDRSLM GTLLVHLHAK LGDGLSNQLR QSKAMAPDYS
VRWWKSKCMQ PPNIDIVNFI SQRLEWRYKF GIVQPAEGIR KPQILLGDNR QLLSKYRNKQ
KADLILTSPP YYGVTNYRYD NWIRLWLLGE GSSLPDSDSW ARHSDRSEYF KLLKETFYHC
KKRAKADAVI YVRTDARKFT LETTIKILKE TWPDKDLFYS YDGFKKATQT ALFGDKNEKP
GEFDLILLPQ GQKPKDSMRI FDGKLPLNVL AQT
|
|---|
| |