Gene Sputcn32_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3939 
Symbol 
ID5081372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4578385 
End bp4580286 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content39% 
IMG OID640501153 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001185443 
Protein GI146295019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTTGTG TCAGAAAAAA TGATAGATTT TCTGACATGA GTATTACGAC TTCAATTAGA 
AACTGGTTGT TGACAAAGGC AGACGGTTAC GTTTTCTGTT GTCGAGAACT ATTATGTTAT
GGGTCCAGAG ATTCCATAGA TAAGTGCCTT AGCAGACTAT GCCAAGCTGG CTCAATTGAG
AGATTAGCAA GAGGTATTTA TAAAATATCC TCCTTCGATT CTAGCAAAAG CAGTCATGAC
GTCGTCACAC ATGTTGTGTC CGCCATAAGC AGAACTCAAA ATCTTCCGAT ACACAATAAT
GGATATTTGT CATATGAAGA ACTATGTAAG TCTGAATATG ACAATAGTTA TTCATTGATT
GACAGAGATA AAATTTACAC AGAGTATTGG TGGGCGGGAA ATACAAAAAA TATTAACGTT
AAAGGCCATC AAATCCGAAT TAAAAAAGTT AGTCCGAGGA AATTAGCACA AAATAAAGGC
AATGTAGGCT TGGCAATTTC TTCTGTCTGG GCTCTAGGTA AGGAACGTCT GACTAACGAA
GTTGTTAAGA ATATAATATT TAATTTATCT AGCGATGAGC AAAATGATTT AAAAAACTCT
CTTGGATTCA TGCCATCTTG GGCATCTGAT ATTTTCTTGA AAGTTATGCA GGATTTAGAA
TGTTTCAAGC CGCATTTTCA AAGCATCTCC AATACCGCAT GTTCAGTTAT CGACAACGAC
ATAACCAGCG AAGATCATCT TGATTATAAA TGGACGACGG GGACAGTTGA GGGGCGATGG
AGTGGTTTTG GACCATACTA TGCAATGTTC CCGGTTGACT TTGCTAGAAA AGTTATAACC
AAATACTGTC CTGTAGGAGG GGTAGTTTTA GATCCATTCT GTGGTAGAGG TACAGTGCCT
TTCGTGTCGA TGGCAACGGG AAGATATGCC ATAGGCTGCG ATATTAATCC TGTAGCCTGG
CTTTATGCAA AGGTCAAAAC TGATCCATAT ATTAAACACC AGCTCTTAAT TAAGCGGGCG
AGAGAAATTC AGAGTATGGT GTCGTATGAC GACATGCAGC CAGAGAACGA ATTTCAACAG
TATGCTTGGT CTCCAGCAGT ATTAGGTTTT TTGAATGTAG CAAGAAGAGA ACTGGATTGG
AAGAACTCTA ATCTTGACCG CTCTTTGATG GGGACTTTGT TAGTGCACTT GCATGCTAAA
CTTGGCGATG GCTTATCAAA TCAACTTCGT CAATCAAAGG CTATGGCTCC AGATTACTCT
GTCCGTTGGT GGAAATCAAA ATGTATGCAA CCACCGAACA TTGACATCGT TAATTTTATA
TCTCAACGAT TGGAATGGAG ATATAAATTC GGAATAGTGC AACCTGCCGA AGGAATTAGA
AAGCCACAAA TACTACTGGG CGACAATAGA CAACTATTGT CCAAGTACAG AAATAAGCAA
AAAGCAGATT TGATTCTCAC ATCACCTCCT TACTACGGCG TAACAAACTA TAGGTACGAT
AACTGGATAA GGCTTTGGCT ACTTGGCGAA GGTAGCTCGC TGCCAGATAG TGACTCTTGG
GCTAGACATA GTGATAGAAG TGAGTACTTC AAGTTACTGA AAGAAACATT TTATCATTGC
AAAAAAAGAG CAAAAGCAGA TGCTGTAATA TATGTCAGGA CGGATGCTAG AAAATTCACT
TTAGAAACTA CAATCAAAAT TTTAAAAGAA ACTTGGCCAG ATAAAGATCT CTTTTATTCT
TATGATGGAT TCAAAAAAGC TACCCAAACA GCTTTATTTG GAGATAAAAA CGAAAAGCCA
GGGGAATTTG ACCTTATTCT TCTTCCGCAA GGCCAAAAAC CTAAAGACTC CATGAGAATT
TTTGATGGTA AACTACCATT AAATGTACTA GCTCAGACTT GA
 
Protein sequence
MFCVRKNDRF SDMSITTSIR NWLLTKADGY VFCCRELLCY GSRDSIDKCL SRLCQAGSIE 
RLARGIYKIS SFDSSKSSHD VVTHVVSAIS RTQNLPIHNN GYLSYEELCK SEYDNSYSLI
DRDKIYTEYW WAGNTKNINV KGHQIRIKKV SPRKLAQNKG NVGLAISSVW ALGKERLTNE
VVKNIIFNLS SDEQNDLKNS LGFMPSWASD IFLKVMQDLE CFKPHFQSIS NTACSVIDND
ITSEDHLDYK WTTGTVEGRW SGFGPYYAMF PVDFARKVIT KYCPVGGVVL DPFCGRGTVP
FVSMATGRYA IGCDINPVAW LYAKVKTDPY IKHQLLIKRA REIQSMVSYD DMQPENEFQQ
YAWSPAVLGF LNVARRELDW KNSNLDRSLM GTLLVHLHAK LGDGLSNQLR QSKAMAPDYS
VRWWKSKCMQ PPNIDIVNFI SQRLEWRYKF GIVQPAEGIR KPQILLGDNR QLLSKYRNKQ
KADLILTSPP YYGVTNYRYD NWIRLWLLGE GSSLPDSDSW ARHSDRSEYF KLLKETFYHC
KKRAKADAVI YVRTDARKFT LETTIKILKE TWPDKDLFYS YDGFKKATQT ALFGDKNEKP
GEFDLILLPQ GQKPKDSMRI FDGKLPLNVL AQT