Gene Sputcn32_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3900 
Symbol 
ID5081330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp4525721 
End bp4526368 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID640501112 
ProductTetR family transcriptional regulator 
Protein accessionYP_001185405 
Protein GI146294981 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.113348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCC GCGACAAAAT AATCTATGCC AGCCTTGAAT TATTCAACGA GCATGGCGAA 
AGAAACATCA CCACCAACCA TATAGCCGCC CATTTAAATA TGAGTCCAGG GAATCTTTAT 
TATCATTTCC GCAATAAAGA GGACATTATC CGCTCCATTT TCAGCTTGTA TGAAAATCAT 
CTCGAATCAG GTTTCCAACC CTATGAAGAT AAGCAAGTGG ATGTAGAACT GTTAATCGGC 
TACTTTGATG CCATGTTTTA CACTCTGTGG CAATTCCGTT TTATGTACGC CAATCTTGCC 
GATATTCTTG CCCGCGACGA AGCATTAAAA AAACGTTATC TGCACGCACA ACAACAAGTG 
TTAACGCGCT CCAGTCATGT GTTGCATAAG CTAAAACTCG ATGGTTTTTT AAGTGTCGAT 
ACTGACAAAA TCACGCCACT CGCGGATACC ATAAAAATGA TCGTCAGCTT TTGGATTGGT 
TATCAACTCA CTCAATCCAG CACCTCGACC ATCACTAAAG CGACCCTCTA TGAAGGTGTT 
TTGAGGGTAC TAATGATTTT CAAAGCCTAT GCAACACCGA CATCCGTCGC GACGTTTACT 
CGCCTAGAGC AGCACTACCA CGCGCTAGCG AATCAAGAAT CCCTCTAG
 
Protein sequence
MKTRDKIIYA SLELFNEHGE RNITTNHIAA HLNMSPGNLY YHFRNKEDII RSIFSLYENH 
LESGFQPYED KQVDVELLIG YFDAMFYTLW QFRFMYANLA DILARDEALK KRYLHAQQQV 
LTRSSHVLHK LKLDGFLSVD TDKITPLADT IKMIVSFWIG YQLTQSSTST ITKATLYEGV 
LRVLMIFKAY ATPTSVATFT RLEQHYHALA NQESL