| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3886 |
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| Symbol | |
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| ID | 5081268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4510500 |
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| End bp | 4511315 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640501098 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001185391 |
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| Protein GI | 146294967 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAT TACCAGAAGT TGAAGTCACC CGTCAGGGTA TTGCCCCCTT TCTTATTGAG
CAAACTGTCT CGGATCTTGT GATACGTAAT GGCTCACTAC GTTGGCCAGT ACCTGATATC
GCTAAACACA TTATTGGCCA AACCATACGC CAAGTGCGCC GACGTGCTAA ATATCTGTTA
ATCGATACAG ATGCAGGCAC GACTATCGTC CATTTAGGTA TGTCGGGAAG TTTGCGGATC
TTGCCGCACA ACACTCCCGT TGAAAAACAT GACCATATCG ACTTAGTGCT CGCCAATGGG
CGTATATTAC GCTTTAACGA CCCTAGACGT TTTGGTGCTT GGCTTTGGTG CGAACTCCCT
GAAGAAGCCC ATCCATTACT CGCCAAACTT GGGCCAGAAC CTTTAACCAA TGCCTTTAAT
GTTAATCAAT TAGCCACCGC ATTAGCGGGA AAAAAGAAGG CAATTAAACT CTGTTTAATG
GATAACCATA TTGTCGTCGG TGTGGGGAAT ATTTACGCTA ACGAGGCGCT ATTTGCAGCA
GGTATTCACC CAGAAGCCGA AGCGGGAAAA ATCGATAATG AACGCTTAAG CCTATTAGTT
GCTGAGGTGA AGCAAATCTT AGCTCACGCG ATAAAGCAGG GAGGAACCAC ACTGAAAGAC
TTCACCAATG CTGAGGGTAA ACCGGGATAT TTTGCTCAAA AACTCCATGT TTATGGTCGA
GGCGGCGAAA CCTGCACAAA CTGTGGAAAC CTACTCAGTG AAATCCGTTT AGGCCAACGT
ACCACCGTTT TTTGTAGTAT TTGCCAAACT CGTTGA
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| Protein sequence | MPELPEVEVT RQGIAPFLIE QTVSDLVIRN GSLRWPVPDI AKHIIGQTIR QVRRRAKYLL
IDTDAGTTIV HLGMSGSLRI LPHNTPVEKH DHIDLVLANG RILRFNDPRR FGAWLWCELP
EEAHPLLAKL GPEPLTNAFN VNQLATALAG KKKAIKLCLM DNHIVVGVGN IYANEALFAA
GIHPEAEAGK IDNERLSLLV AEVKQILAHA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR
GGETCTNCGN LLSEIRLGQR TTVFCSICQT R
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