| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3872 |
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| Symbol | |
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| ID | 5081254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4494683 |
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| End bp | 4496029 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640501084 |
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| Product | ABC transporter related |
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| Protein accession | YP_001185377 |
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| Protein GI | 146294953 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTC TAGAAACCCA AGATGTTAGC TTTAACTATG GTTGTCAGTT AACTACCATA
TTTCAGGAGG TTAACCTCAG CATTCGCACT GGCCAATGCC ATTGTGTGAG TGGACCTACT
GGGTCGGGTA AATCGAGCCT ACTAAACCTC CTTGCGGGCG TATTGACTCG TCCGCATGAG
GGGGATATTT GGCGGCACCC TGAGCTAGTC ACAGGTTTGG TTATGCAGGA TCCACAACTC
CAGCTACTTC GGCAAACAGT CGGTGCAGAA GTCGCCTTTG CATTAGAAAA TCTTGGTATT
CCTGCCGAGA GTATGCTGCC AAAAGTGCAG TTAGCATTGA GACGAGTCGG GTTATTTCTG
AGCCTTGATA CCCAAGTGAG TACGCTTTCC CTTGGGCAAA AATATCGGCT GATGATCGCT
TCCCAACTGG TATGTGAACC ACATTTGCTG TTACTCGATG AGCCTTGGGC ACAGCTTGAT
GATCATGGTG TAAGCGAACT GTTGGGGGTG ATGCGGAATT TACTGCAAGA GGGTATGGCG
TTGGTGCTGG TTGAACATAA CGCCCATGCT TTTGCCGATA TTATCCAGCA TTACTGGCAG
TTAGAGCGGG GCAAACTCTC CGAAGGGATT TATCTTGCCA CTGATTCAGC GCAAGTTGAG
GTATTTAAGT GGCAAAACTA CTGTAAACGA GAACACTTAG GTAAAGTACT CGTGAAGGCT
GATGCGTTTG ATTTTGGTTA CGATAATAAC CCTGTTTTAT TTAGTTGCCC GCAGGGATTT
CAACTACAGT CAGGGGAGAT TGTGACATTA GTTGGCGATA ACGCTTCAGG TAAAACGAGT
CTACTAAAAA TCCTCGCCGG GGTGCTTAAT ATAAGACAAA GACTACCTAT CAAAGTGTTA
GGAAGAAGGC CAAAACTCGG CGTGTATGGG GCAGAACTTG GCTTATTAAT GCAAAGACCA
AGTCGACAAC TGTTTGAAAC CAGCGTGCTA GCCGAGATGC AATTTCGTTT AAAGCGATTT
AAGCTTCCGA AGGAACGCGC AATCCAAATA TTAGATGAGC TAGCGTTATC CTCTTTAGCA
GAATTATCCC CCCACAAACT GTCCTACGGC CAACAACACT TGATCGCCTT AGCATCCATT
GTTTGTTTAC GTCCTCGGGT GTTGTTATTG GATGAGCCTT TAGCGGGTAT GGATAAAGAT
TACTACGGTA AAGTTTGGCA CCTGCTGACA GGTCTAAGCT CTCAAGGTAG TGCCATTGTA
CTCAGTAGCC ATAGAAACAT TAAACATGAT GCAGTTTCAC GACAATGGTG TTTGCGTAAT
AGGCAATTGG TGTCGGAATC AATGTAG
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| Protein sequence | MKLLETQDVS FNYGCQLTTI FQEVNLSIRT GQCHCVSGPT GSGKSSLLNL LAGVLTRPHE
GDIWRHPELV TGLVMQDPQL QLLRQTVGAE VAFALENLGI PAESMLPKVQ LALRRVGLFL
SLDTQVSTLS LGQKYRLMIA SQLVCEPHLL LLDEPWAQLD DHGVSELLGV MRNLLQEGMA
LVLVEHNAHA FADIIQHYWQ LERGKLSEGI YLATDSAQVE VFKWQNYCKR EHLGKVLVKA
DAFDFGYDNN PVLFSCPQGF QLQSGEIVTL VGDNASGKTS LLKILAGVLN IRQRLPIKVL
GRRPKLGVYG AELGLLMQRP SRQLFETSVL AEMQFRLKRF KLPKERAIQI LDELALSSLA
ELSPHKLSYG QQHLIALASI VCLRPRVLLL DEPLAGMDKD YYGKVWHLLT GLSSQGSAIV
LSSHRNIKHD AVSRQWCLRN RQLVSESM
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