| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3829 |
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| Symbol | |
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| ID | 5081163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4442825 |
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| End bp | 4444108 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640501041 |
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| Product | arsenical pump membrane protein |
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| Protein accession | YP_001185334 |
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| Protein GI | 146294910 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00505974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTGG CAGGGGCGAT TTTTGTTCTC ACCATAGTGT TAGTGATTTG GCAACCTAAG
GGTTTAGGCA TAGGTTGGAG TGCCACCTTG GGCGCCGTAT TGGCCTTGCT ATTAGGCGTA
GTGCAGTTAG GGGATATTCC CGTGGTGTGG AATATCGTCT GGAATGCGAC CGCCACCTTT
ATCGCCGTGA TCATCATCAG TTTATTATTG GATGAGTCAG GATTTTTCGA ATGGGCCGCG
CTGCATGTGG CCCGCTGGGG TAAAGGTCGT GGCCGTTTAC TCTTTACTTA CATAGTGTTA
CTCGGTGCTA CCGTTGCAGC CTTATTCGCC AATGATGGCG CGGCGCTGAT CCTCACCCCA
ATCGTGATTG CGATGTTACT GGCGCTGGGC TTTAGCGCCG GAGCCACCTT AGCCTTTGTG
ATGGCCGCAG GTTTTATTGC CGATACCGCA AGTTTGCCGT TAATCGTCTC TAACCTAGTG
AATATCGTTT CCGCGGACTT TTTCAAGATA GGCTTTAACG AATATGCCGC TGTAATGGTG
CCCGTCGATA TTGCCGCGAT TAGCGCCACA TTAGTGATGC TGCATGTGTT TTTCCGCAAA
GATATTCCAG CCACCTACGA CCTAGAAAAA CTGCGCGAGC CTAAGGCCGC AATTCGCGAC
CTCAACACCT TTAAAACCGG TTGGGGAGTT TTAGTCTTAC TCTTAGTCGG CTTTTTTGGC
CTAGAACCCC TCGGCGTGCC CGTGAGTTTA GTTGCTGCCG TGGGCGCGCT TATTCTGTTT
GTGGTCGCCA AGAAAGGCCA TGGGATAGAT ACCACTAAGG TACTGCGCGG CGCACCATGG
CAGATAGTGA TCTTTTCACT GGGTATGTAT CTGGTGGTTT ATGGTCTGCG TAACGCAGGC
TTAACGGATT ATCTATCTCA CGTGTTGGAC AGCTTGGCAG CACAAGGACT TTGGGTTGCC
ACTATGGGCA CAGGTTTTTT AGTCGCCTTT TTATCTTCCA TCATGAACAA CATGCCAACC
GTGTTAGTCG GCGCCCTGTC GATAGACGGT AGCAATGCAA CCGGCGTGAT TAAAGAAGCC
ATGATCTACG CTAACGTGAT AGGCAGCGAT TTAGGCCCCA AAATCACCCC TATCGGCAGT
TTAGCAACCC TGCTATGGCT GCATGTGCTG GCGCAGAAAA ATATCAATAT AACTTGGGGT
TACTATTTCC GCGTCGGCAT AGTGATGACA GTACCTGTGC TGTTTGTCAC CCTAGCGGCA
CTGGCGCTGC GCCTCTCCTT CTGA
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| Protein sequence | MWLAGAIFVL TIVLVIWQPK GLGIGWSATL GAVLALLLGV VQLGDIPVVW NIVWNATATF
IAVIIISLLL DESGFFEWAA LHVARWGKGR GRLLFTYIVL LGATVAALFA NDGAALILTP
IVIAMLLALG FSAGATLAFV MAAGFIADTA SLPLIVSNLV NIVSADFFKI GFNEYAAVMV
PVDIAAISAT LVMLHVFFRK DIPATYDLEK LREPKAAIRD LNTFKTGWGV LVLLLVGFFG
LEPLGVPVSL VAAVGALILF VVAKKGHGID TTKVLRGAPW QIVIFSLGMY LVVYGLRNAG
LTDYLSHVLD SLAAQGLWVA TMGTGFLVAF LSSIMNNMPT VLVGALSIDG SNATGVIKEA
MIYANVIGSD LGPKITPIGS LATLLWLHVL AQKNINITWG YYFRVGIVMT VPVLFVTLAA
LALRLSF
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